Exploring the optimal strategy of imputation from SNP array to whole-genome sequencing data in farm animals

Genotype imputation from BeadChip to whole-genome sequencing (WGS) data is a cost-effective method of obtaining genotypes of WGS variants. Beagle, one of the most popular imputation software programs, has been widely used for genotype inference in humans and non-human species. A few studies have sys...

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Bibliographic Details
Main Authors: Yifan Jiang, Hailiang Song, Hongding Gao, Qin Zhang, Xiangdong Ding
Format: Article
Language:English
Published: Frontiers Media S.A. 2022-08-01
Series:Frontiers in Genetics
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fgene.2022.963654/full