Comparison of SARS-CoV-2 sequencing using the ONT GridION and the Illumina MiSeq

Comparison of SARS-CoV-2 sequencing using the ONT GridION and the Illumina MiSeq

Abstract Background Over 4 million SARS-CoV-2 genomes have been sequenced globally in the past 2 years. This has been crucial in elucidating transmission chains within communities, the development of new diagnostic methods, vaccines, and antivirals. Although several sequencing technologies have been...

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Bibliographic Details
Main Authors: Derek Tshiabuila, Jennifer Giandhari, Sureshnee Pillay, Upasana Ramphal, Yajna Ramphal, Arisha Maharaj, Ugochukwu Jacob Anyaneji, Yeshnee Naidoo, Houriiyah Tegally, Emmanuel James San, Eduan Wilkinson, Richard J. Lessells, Tulio de Oliveira
Format: Article
Language:English
Published: BMC 2022-04-01
Series:BMC Genomics
Subjects:
SARS-CoV-2
Illumina MiSeq
Oxford Nanopore technology GridION
Nanopore sequencing, next generation sequencing, bioinformatics
Online Access:https://doi.org/10.1186/s12864-022-08541-5

Internet

https://doi.org/10.1186/s12864-022-08541-5

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