Recovery of metagenomic data from the Aedes aegypti microbiome using a reproducible snakemake pipeline: MINUUR [version 2; peer review: 1 approved, 2 approved with reservations]

Background: Ongoing research of the mosquito microbiome aims to uncover novel strategies to reduce pathogen transmission. Sequencing costs, especially for metagenomics, are however still significant. A resource that is increasingly used to gain insights into host-associated microbiomes is the large...

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Bibliographic Details
Main Authors: Grant L. Hughes, Louise Cerdeira, Eva Heinz, Aidan Foo
Format: Article
Language:English
Published: Wellcome 2023-05-01
Series:Wellcome Open Research
Subjects:
Online Access:https://wellcomeopenresearch.org/articles/8-131/v2