Improving MHC class I antigen-processing predictions using representation learning and cleavage site-specific kernels

Summary: In this work, we propose a new deep-learning model, MHCrank, to predict the probability that a peptide will be processed for presentation by MHC class I molecules. We find that the performance of our model is significantly higher than that of two previously published baseline methods: MHCfl...

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Bibliographic Details
Main Authors: Patrick J. Lawrence, Xia Ning
Format: Article
Language:English
Published: Elsevier 2022-09-01
Series:Cell Reports: Methods
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2667237522001758