Nf-Root: A Best-Practice Pipeline for Deep-Learning-Based Analysis of Apoplastic pH in Microscopy Images of Developmental Zones in Plant Root Tissue

Hormonal mechanisms associated with cell elongation play a vital role in the development and growth of plants. Here, we report Nextflow-root (nf-root), a novel best-practice pipeline for deep-learning-based analysis of fluorescence microscopy images of plant root tissue from A. thaliana. This bioinf...

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Bibliographic Details
Main Authors: Julian Wanner, Luis Kuhn Cuellar, Luiselotte Rausch, Kenneth W. Berendzen, Friederike Wanke, Gisela Gabernet, Klaus Harter, Sven Nahnsen
Format: Article
Language:English
Published: Cambridge University Press 2024-01-01
Series:Quantitative Plant Biology
Online Access:https://www.cambridge.org/core/product/identifier/S2632882824000110/type/journal_article