Web-MCOT Server for Motif Co-Occurrence Search in ChIP-Seq Data

Web-MCOT Server for Motif Co-Occurrence Search in ChIP-Seq Data

(1) Background: The widespread application of ChIP-seq technology requires annotation of cis-regulatory modules through the search of co-occurred motifs. (2) Methods: We present the web server Motifs Co-Occurrence Tool (Web-MCOT) that for a single ChIP-seq dataset detects the composite elements (CEs...

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Bibliographic Details
Main Authors: Victor G. Levitsky, Alexey M. Mukhin, Dmitry Yu. Oshchepkov, Elena V. Zemlyanskaya, Sergey A. Lashin
Format: Article
Language:English
Published: MDPI AG 2022-08-01
Series:International Journal of Molecular Sciences
Subjects:
chromatin immunoprecipitation with massively parallel sequencing
transcription factors binding sites prediction
co-binding of transcription factors
composite elements
transcription factor binding sites
motifs conservation
Online Access:https://www.mdpi.com/1422-0067/23/16/8981

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https://www.mdpi.com/1422-0067/23/16/8981

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