CRISPR-SURF: discovering regulatory elements by deconvolution of CRISPR tiling screen data
Tiling screens that use CRISPR-Cas technologies provide a powerful approach for the mapping of regulatory elements to phenotypes of interest1–6. Here we present CRISPR screening uncharacterized region function (CRISPR-SURF), a deconvolution framework that can be used to identify functional regulator...
Main Authors: | Hsu, Jonathan Y., Fulco, Charles P., Farouni, Rick, Clement, Kendell, Engreitz, Jesse Michael, Lander, Eric Steven, Pinello, Luca |
---|---|
Other Authors: | Massachusetts Institute of Technology. Department of Biological Engineering |
Format: | Article |
Language: | English |
Published: |
Springer Science and Business Media LLC
2020
|
Online Access: | https://hdl.handle.net/1721.1/125387 |
Similar Items
-
Integrated design, execution, and analysis of arrayed and pooled CRISPR genome-editing experiments
by: Zhang, Feng, et al.
Published: (2020) -
Development and Applications of CRISPR-Cas9 for Genome Engineering
by: Hsu, Patrick, et al.
Published: (2017) -
Activity-by-contact model of enhancer–promoter regulation from thousands of CRISPR perturbations
by: Fulco, Charles P., et al.
Published: (2021) -
High throughput single-cell detection of multiplex CRISPR-edited gene modifications
by: Elisa ten Hacken, et al.
Published: (2020-10-01) -
CRISPR–Cas system to discover host-virus interactions in Flaviviridae
by: Zahra Ramezannia, et al.
Published: (2023-10-01)