Stress-induced nuclear condensation of NELF drives transcriptional downregulation

In response to stress, human cells coordinately downregulate transcription and translation of housekeeping genes. To downregulate transcription, the negative elongation factor (NELF) is recruited to gene promoters impairing RNA polymerase II elongation. Here we report that NELF rapidly forms nuclear...

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Main Authors: Rawat, Prashant, Boehning, Marc, Hummel, Barbara, Aprile-Garcia, Fernando, Pandit, Anwit S, Eisenhardt, Nathalie, Khavaran, Ashkan, Niskanen, Einari, Vos, Seychelle M, Palvimo, Jorma J, Pichler, Andrea, Cramer, Patrick, Sawarkar, Ritwick
Format: Article
Language:English
Published: Elsevier BV 2021
Online Access:https://hdl.handle.net/1721.1/134062
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author Rawat, Prashant
Boehning, Marc
Hummel, Barbara
Aprile-Garcia, Fernando
Pandit, Anwit S
Eisenhardt, Nathalie
Khavaran, Ashkan
Niskanen, Einari
Vos, Seychelle M
Palvimo, Jorma J
Pichler, Andrea
Cramer, Patrick
Sawarkar, Ritwick
author_facet Rawat, Prashant
Boehning, Marc
Hummel, Barbara
Aprile-Garcia, Fernando
Pandit, Anwit S
Eisenhardt, Nathalie
Khavaran, Ashkan
Niskanen, Einari
Vos, Seychelle M
Palvimo, Jorma J
Pichler, Andrea
Cramer, Patrick
Sawarkar, Ritwick
author_sort Rawat, Prashant
collection MIT
description In response to stress, human cells coordinately downregulate transcription and translation of housekeeping genes. To downregulate transcription, the negative elongation factor (NELF) is recruited to gene promoters impairing RNA polymerase II elongation. Here we report that NELF rapidly forms nuclear condensates upon stress in human cells. Condensate formation requires NELF dephosphorylation and SUMOylation induced by stress. The intrinsically disordered region (IDR) in NELFA is necessary for nuclear NELF condensation and can be functionally replaced by the IDR of FUS or EWSR1 protein. We find that biomolecular condensation facilitates enhanced recruitment of NELF to promoters upon stress to drive transcriptional downregulation. Importantly, NELF condensation is required for cellular viability under stressful conditions. We propose that stress-induced NELF condensates reported here are nuclear counterparts of cytosolic stress granules. These two stress-inducible condensates may drive the coordinated downregulation of transcription and translation, likely forming a critical node of the stress survival strategy.
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spelling mit-1721.1/1340622021-10-28T03:02:32Z Stress-induced nuclear condensation of NELF drives transcriptional downregulation Rawat, Prashant Boehning, Marc Hummel, Barbara Aprile-Garcia, Fernando Pandit, Anwit S Eisenhardt, Nathalie Khavaran, Ashkan Niskanen, Einari Vos, Seychelle M Palvimo, Jorma J Pichler, Andrea Cramer, Patrick Sawarkar, Ritwick In response to stress, human cells coordinately downregulate transcription and translation of housekeeping genes. To downregulate transcription, the negative elongation factor (NELF) is recruited to gene promoters impairing RNA polymerase II elongation. Here we report that NELF rapidly forms nuclear condensates upon stress in human cells. Condensate formation requires NELF dephosphorylation and SUMOylation induced by stress. The intrinsically disordered region (IDR) in NELFA is necessary for nuclear NELF condensation and can be functionally replaced by the IDR of FUS or EWSR1 protein. We find that biomolecular condensation facilitates enhanced recruitment of NELF to promoters upon stress to drive transcriptional downregulation. Importantly, NELF condensation is required for cellular viability under stressful conditions. We propose that stress-induced NELF condensates reported here are nuclear counterparts of cytosolic stress granules. These two stress-inducible condensates may drive the coordinated downregulation of transcription and translation, likely forming a critical node of the stress survival strategy. 2021-10-27T19:57:53Z 2021-10-27T19:57:53Z 2021 2021-08-03T17:32:35Z Article http://purl.org/eprint/type/JournalArticle https://hdl.handle.net/1721.1/134062 en 10.1016/j.molcel.2021.01.016 Molecular Cell Creative Commons Attribution-NonCommercial-NoDerivs License http://creativecommons.org/licenses/by-nc-nd/4.0/ application/pdf Elsevier BV Elsevier
spellingShingle Rawat, Prashant
Boehning, Marc
Hummel, Barbara
Aprile-Garcia, Fernando
Pandit, Anwit S
Eisenhardt, Nathalie
Khavaran, Ashkan
Niskanen, Einari
Vos, Seychelle M
Palvimo, Jorma J
Pichler, Andrea
Cramer, Patrick
Sawarkar, Ritwick
Stress-induced nuclear condensation of NELF drives transcriptional downregulation
title Stress-induced nuclear condensation of NELF drives transcriptional downregulation
title_full Stress-induced nuclear condensation of NELF drives transcriptional downregulation
title_fullStr Stress-induced nuclear condensation of NELF drives transcriptional downregulation
title_full_unstemmed Stress-induced nuclear condensation of NELF drives transcriptional downregulation
title_short Stress-induced nuclear condensation of NELF drives transcriptional downregulation
title_sort stress induced nuclear condensation of nelf drives transcriptional downregulation
url https://hdl.handle.net/1721.1/134062
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