Scalable sketching and indexing algorithms for large biological datasets

DNA sequencing data continues to progress towards longer sequencing reads with increasingly lower error rates. In order to efficiently process the ever-growing collections of sequencing data, there is a crucial need for more time- and memory-efficient algorithms and data structures. In this thesis,...

Full description

Bibliographic Details
Main Author: Ekim, Bariş C.
Other Authors: Berger, Bonnie A.
Format: Thesis
Published: Massachusetts Institute of Technology 2023
Online Access:https://hdl.handle.net/1721.1/147392