A synthetic transcription platform for programmable gene expression in mammalian cells

<jats:title>Abstract</jats:title><jats:p>Precise, scalable, and sustainable control of genetic and cellular activities in mammalian cells is key to developing precision therapeutics and smart biomanufacturing. Here we create a highly tunable, modular, versatile CRISPR-based synthet...

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Main Authors: Chen, William CW, Gaidukov, Leonid, Lai, Yong, Wu, Ming-Ru, Cao, Jicong, Gutbrod, Michael J, Choi, Gigi CG, Utomo, Rachel P, Chen, Ying-Chou, Wroblewska, Liliana, Kellis, Manolis, Zhang, Lin, Weiss, Ron, Lu, Timothy K
Other Authors: Massachusetts Institute of Technology. Department of Biological Engineering
Format: Article
Language:English
Published: Springer Science and Business Media LLC 2023
Online Access:https://hdl.handle.net/1721.1/147941
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author Chen, William CW
Gaidukov, Leonid
Lai, Yong
Wu, Ming-Ru
Cao, Jicong
Gutbrod, Michael J
Choi, Gigi CG
Utomo, Rachel P
Chen, Ying-Chou
Wroblewska, Liliana
Kellis, Manolis
Zhang, Lin
Weiss, Ron
Lu, Timothy K
author2 Massachusetts Institute of Technology. Department of Biological Engineering
author_facet Massachusetts Institute of Technology. Department of Biological Engineering
Chen, William CW
Gaidukov, Leonid
Lai, Yong
Wu, Ming-Ru
Cao, Jicong
Gutbrod, Michael J
Choi, Gigi CG
Utomo, Rachel P
Chen, Ying-Chou
Wroblewska, Liliana
Kellis, Manolis
Zhang, Lin
Weiss, Ron
Lu, Timothy K
author_sort Chen, William CW
collection MIT
description <jats:title>Abstract</jats:title><jats:p>Precise, scalable, and sustainable control of genetic and cellular activities in mammalian cells is key to developing precision therapeutics and smart biomanufacturing. Here we create a highly tunable, modular, versatile CRISPR-based synthetic transcription system for the programmable control of gene expression and cellular phenotypes in mammalian cells. Genetic circuits consisting of well-characterized libraries of guide RNAs, binding motifs of synthetic operators, transcriptional activators, and additional genetic regulatory elements express mammalian genes in a highly predictable and tunable manner. We demonstrate the programmable control of reporter genes episomally and chromosomally, with up to 25-fold more activity than seen with the EF1α promoter, in multiple cell types. We use these circuits to program the secretion of human monoclonal antibodies and to control T-cell effector function marked by interferon-γ production. Antibody titers and interferon-γ concentrations significantly correlate with synthetic promoter strengths, providing a platform for programming gene expression and cellular function in diverse applications.</jats:p>
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spelling mit-1721.1/1479412023-02-08T03:14:32Z A synthetic transcription platform for programmable gene expression in mammalian cells Chen, William CW Gaidukov, Leonid Lai, Yong Wu, Ming-Ru Cao, Jicong Gutbrod, Michael J Choi, Gigi CG Utomo, Rachel P Chen, Ying-Chou Wroblewska, Liliana Kellis, Manolis Zhang, Lin Weiss, Ron Lu, Timothy K Massachusetts Institute of Technology. Department of Biological Engineering <jats:title>Abstract</jats:title><jats:p>Precise, scalable, and sustainable control of genetic and cellular activities in mammalian cells is key to developing precision therapeutics and smart biomanufacturing. Here we create a highly tunable, modular, versatile CRISPR-based synthetic transcription system for the programmable control of gene expression and cellular phenotypes in mammalian cells. Genetic circuits consisting of well-characterized libraries of guide RNAs, binding motifs of synthetic operators, transcriptional activators, and additional genetic regulatory elements express mammalian genes in a highly predictable and tunable manner. We demonstrate the programmable control of reporter genes episomally and chromosomally, with up to 25-fold more activity than seen with the EF1α promoter, in multiple cell types. We use these circuits to program the secretion of human monoclonal antibodies and to control T-cell effector function marked by interferon-γ production. Antibody titers and interferon-γ concentrations significantly correlate with synthetic promoter strengths, providing a platform for programming gene expression and cellular function in diverse applications.</jats:p> 2023-02-07T18:30:45Z 2023-02-07T18:30:45Z 2022 2023-02-07T18:24:05Z Article http://purl.org/eprint/type/JournalArticle https://hdl.handle.net/1721.1/147941 Chen, William CW, Gaidukov, Leonid, Lai, Yong, Wu, Ming-Ru, Cao, Jicong et al. 2022. "A synthetic transcription platform for programmable gene expression in mammalian cells." Nature Communications, 13 (1). en 10.1038/S41467-022-33287-9 Nature Communications Creative Commons Attribution 4.0 International license https://creativecommons.org/licenses/by/4.0/ application/pdf Springer Science and Business Media LLC Nature
spellingShingle Chen, William CW
Gaidukov, Leonid
Lai, Yong
Wu, Ming-Ru
Cao, Jicong
Gutbrod, Michael J
Choi, Gigi CG
Utomo, Rachel P
Chen, Ying-Chou
Wroblewska, Liliana
Kellis, Manolis
Zhang, Lin
Weiss, Ron
Lu, Timothy K
A synthetic transcription platform for programmable gene expression in mammalian cells
title A synthetic transcription platform for programmable gene expression in mammalian cells
title_full A synthetic transcription platform for programmable gene expression in mammalian cells
title_fullStr A synthetic transcription platform for programmable gene expression in mammalian cells
title_full_unstemmed A synthetic transcription platform for programmable gene expression in mammalian cells
title_short A synthetic transcription platform for programmable gene expression in mammalian cells
title_sort synthetic transcription platform for programmable gene expression in mammalian cells
url https://hdl.handle.net/1721.1/147941
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