Estimating enrichment of repetitive elements from high-throughput sequence data

We describe computational methods for analysis of repetitive elements from short-read sequencing data, and apply them to study histone modifications associated with the repetitive elements in human and mouse cells. Our results demonstrate that while accurate enrichment estimates can be obtained for...

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Bibliographic Details
Main Authors: Luquette, Lovelace J., Kharchenko, Peter V., Day, Daniel Sindt, Park, Peter J.
Other Authors: Harvard University--MIT Division of Health Sciences and Technology
Format: Article
Language:en_US
Published: Springer (Biomed Central Ltd.) 2012
Online Access:http://hdl.handle.net/1721.1/69545