Pride-asap: Automatic fragment ion annotation of identified PRIDE spectra

We present an open source software application and library written in Java that provides a uniform annotation of identified spectra stored in the PRIDE database. Pride-asap can be ran in a command line mode for automated processing of multiple PRIDE experiments, but also has a graphical user interfa...

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Bibliographic Details
Main Authors: Hulstaert, Niels, Reisinger, Florian, Rameseder, Jonathan, Barsnes, Harald, Martens, Lennart, Vizcaino, Juan Antonio
Other Authors: Massachusetts Institute of Technology. Computational and Systems Biology Program
Format: Article
Language:en_US
Published: Elsevier 2014
Online Access:http://hdl.handle.net/1721.1/90622