BANKSY unifies cell typing and tissue domain segmentation for scalable spatial omics data analysis
Spatial omics data are clustered to define both cell types and tissue domains. We present Building Aggregates with a Neighborhood Kernel and Spatial Yardstick (BANKSY), an algorithm that unifies these two spatial clustering problems by embedding cells in a product space of their own and the local ne...
Main Authors: | Singhal, Vipul, Chou, Nigel, Lee, Joseph, Yue, Yifei, Liu, Jinyue, Chock, Wan Kee, Lin, Li, Chang, Yun-Ching, Teo, Erica Mei Ling, Aow, Jonathan, Lee, Hwee Kuan, Chen, Kok Hao, Prabhakar, Shyam |
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Other Authors: | School of Biological Sciences |
Format: | Journal Article |
Language: | English |
Published: |
2024
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Subjects: | |
Online Access: | https://hdl.handle.net/10356/178723 |
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