Automated subtyping of HIV-1 genetic sequences for clinical and surveillance purposes: performance evaluation of the new REGA version 3 and seven other tools.

BACKGROUND: To investigate differences in pathogenesis, diagnosis and resistance pathways between HIV-1 subtypes, an accurate subtyping tool for large datasets is needed. We aimed to evaluate the performance of automated subtyping tools to classify the different subtypes and circulating recombinant...

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Bibliographic Details
Main Authors: Pineda-Peña, A, Faria, N, Imbrechts, S, Libin, P, Abecasis, AB, Deforche, K, Gómez-López, A, Camacho, R, de Oliveira, T, Vandamme, A
Format: Journal article
Language:English
Published: 2013