An alkyne linchpin strategy for drug:pharmacophore conjugation: Experimental and computational realization of a meta-selective inverse sonogashira coupling

The late-stage functionalization (LSF) of pharmaceutical and agrochemical compounds by the site-selective activation of C-H bonds offers immediate access to diverse structural analogs and expands the accessible chemical space. We report a C-H functionalization LSF strategy that hinges on the use of...

Full description

Bibliographic Details
Main Authors: Porey, S, Zhang, X, Bhowmick, S, Kumar Singh, V, Guin, S, Paton, R, Maiti, D
Format: Journal article
Language:English
Published: American Chemical Society 2020
Description
Summary:The late-stage functionalization (LSF) of pharmaceutical and agrochemical compounds by the site-selective activation of C-H bonds offers immediate access to diverse structural analogs and expands the accessible chemical space. We report a C-H functionalization LSF strategy that hinges on the use of an alkyne linchpin to assemble conjugates of sp2-rich marketed pharmaceuticals and agrochemicals with sp3-rich 3D-fragments and natural products. This is accomplished through a template-assisted inverse Sonogashira reaction that displays high levels of selectivity for the meta-position. This protocol is also amenable to distal structural modifications of α-amino acids. The transformation of alkyne functionality to other functional groups further highlights the applicative potential. Computational and experimental mechanistic studies shed light on the detailed mechanism. Turnover-limiting 1,2-migratory insertion of the bromoalkyne coupling partner occurs after relatively fast C-H activation. While this insertion occurs unselectively, regioconvergence results from one of the adducts undergoing a 1,2-trialkylsilyl migration to form the alkynylated product. A heterobimetallic Pd-Ag TS, which is essential for product formation, is explicitly implicated in the β-bromide elimination step.