An alkyne linchpin strategy for drug:pharmacophore conjugation: Experimental and computational realization of a meta-selective inverse sonogashira coupling

The late-stage functionalization (LSF) of pharmaceutical and agrochemical compounds by the site-selective activation of C-H bonds offers immediate access to diverse structural analogs and expands the accessible chemical space. We report a C-H functionalization LSF strategy that hinges on the use of...

Full description

Bibliographic Details
Main Authors: Porey, S, Zhang, X, Bhowmick, S, Kumar Singh, V, Guin, S, Paton, R, Maiti, D
Format: Journal article
Language:English
Published: American Chemical Society 2020
_version_ 1797052509019176960
author Porey, S
Zhang, X
Bhowmick, S
Kumar Singh, V
Guin, S
Paton, R
Maiti, D
author_facet Porey, S
Zhang, X
Bhowmick, S
Kumar Singh, V
Guin, S
Paton, R
Maiti, D
author_sort Porey, S
collection OXFORD
description The late-stage functionalization (LSF) of pharmaceutical and agrochemical compounds by the site-selective activation of C-H bonds offers immediate access to diverse structural analogs and expands the accessible chemical space. We report a C-H functionalization LSF strategy that hinges on the use of an alkyne linchpin to assemble conjugates of sp2-rich marketed pharmaceuticals and agrochemicals with sp3-rich 3D-fragments and natural products. This is accomplished through a template-assisted inverse Sonogashira reaction that displays high levels of selectivity for the meta-position. This protocol is also amenable to distal structural modifications of α-amino acids. The transformation of alkyne functionality to other functional groups further highlights the applicative potential. Computational and experimental mechanistic studies shed light on the detailed mechanism. Turnover-limiting 1,2-migratory insertion of the bromoalkyne coupling partner occurs after relatively fast C-H activation. While this insertion occurs unselectively, regioconvergence results from one of the adducts undergoing a 1,2-trialkylsilyl migration to form the alkynylated product. A heterobimetallic Pd-Ag TS, which is essential for product formation, is explicitly implicated in the β-bromide elimination step.
first_indexed 2024-03-06T18:32:34Z
format Journal article
id oxford-uuid:0a2988fa-fc84-4766-a4f3-39ad79da391b
institution University of Oxford
language English
last_indexed 2024-03-06T18:32:34Z
publishDate 2020
publisher American Chemical Society
record_format dspace
spelling oxford-uuid:0a2988fa-fc84-4766-a4f3-39ad79da391b2022-03-26T09:22:20ZAn alkyne linchpin strategy for drug:pharmacophore conjugation: Experimental and computational realization of a meta-selective inverse sonogashira couplingJournal articlehttp://purl.org/coar/resource_type/c_dcae04bcuuid:0a2988fa-fc84-4766-a4f3-39ad79da391bEnglishSymplectic Elements at OxfordAmerican Chemical Society2020Porey, SZhang, XBhowmick, SKumar Singh, VGuin, SPaton, RMaiti, DThe late-stage functionalization (LSF) of pharmaceutical and agrochemical compounds by the site-selective activation of C-H bonds offers immediate access to diverse structural analogs and expands the accessible chemical space. We report a C-H functionalization LSF strategy that hinges on the use of an alkyne linchpin to assemble conjugates of sp2-rich marketed pharmaceuticals and agrochemicals with sp3-rich 3D-fragments and natural products. This is accomplished through a template-assisted inverse Sonogashira reaction that displays high levels of selectivity for the meta-position. This protocol is also amenable to distal structural modifications of α-amino acids. The transformation of alkyne functionality to other functional groups further highlights the applicative potential. Computational and experimental mechanistic studies shed light on the detailed mechanism. Turnover-limiting 1,2-migratory insertion of the bromoalkyne coupling partner occurs after relatively fast C-H activation. While this insertion occurs unselectively, regioconvergence results from one of the adducts undergoing a 1,2-trialkylsilyl migration to form the alkynylated product. A heterobimetallic Pd-Ag TS, which is essential for product formation, is explicitly implicated in the β-bromide elimination step.
spellingShingle Porey, S
Zhang, X
Bhowmick, S
Kumar Singh, V
Guin, S
Paton, R
Maiti, D
An alkyne linchpin strategy for drug:pharmacophore conjugation: Experimental and computational realization of a meta-selective inverse sonogashira coupling
title An alkyne linchpin strategy for drug:pharmacophore conjugation: Experimental and computational realization of a meta-selective inverse sonogashira coupling
title_full An alkyne linchpin strategy for drug:pharmacophore conjugation: Experimental and computational realization of a meta-selective inverse sonogashira coupling
title_fullStr An alkyne linchpin strategy for drug:pharmacophore conjugation: Experimental and computational realization of a meta-selective inverse sonogashira coupling
title_full_unstemmed An alkyne linchpin strategy for drug:pharmacophore conjugation: Experimental and computational realization of a meta-selective inverse sonogashira coupling
title_short An alkyne linchpin strategy for drug:pharmacophore conjugation: Experimental and computational realization of a meta-selective inverse sonogashira coupling
title_sort alkyne linchpin strategy for drug pharmacophore conjugation experimental and computational realization of a meta selective inverse sonogashira coupling
work_keys_str_mv AT poreys analkynelinchpinstrategyfordrugpharmacophoreconjugationexperimentalandcomputationalrealizationofametaselectiveinversesonogashiracoupling
AT zhangx analkynelinchpinstrategyfordrugpharmacophoreconjugationexperimentalandcomputationalrealizationofametaselectiveinversesonogashiracoupling
AT bhowmicks analkynelinchpinstrategyfordrugpharmacophoreconjugationexperimentalandcomputationalrealizationofametaselectiveinversesonogashiracoupling
AT kumarsinghv analkynelinchpinstrategyfordrugpharmacophoreconjugationexperimentalandcomputationalrealizationofametaselectiveinversesonogashiracoupling
AT guins analkynelinchpinstrategyfordrugpharmacophoreconjugationexperimentalandcomputationalrealizationofametaselectiveinversesonogashiracoupling
AT patonr analkynelinchpinstrategyfordrugpharmacophoreconjugationexperimentalandcomputationalrealizationofametaselectiveinversesonogashiracoupling
AT maitid analkynelinchpinstrategyfordrugpharmacophoreconjugationexperimentalandcomputationalrealizationofametaselectiveinversesonogashiracoupling
AT poreys alkynelinchpinstrategyfordrugpharmacophoreconjugationexperimentalandcomputationalrealizationofametaselectiveinversesonogashiracoupling
AT zhangx alkynelinchpinstrategyfordrugpharmacophoreconjugationexperimentalandcomputationalrealizationofametaselectiveinversesonogashiracoupling
AT bhowmicks alkynelinchpinstrategyfordrugpharmacophoreconjugationexperimentalandcomputationalrealizationofametaselectiveinversesonogashiracoupling
AT kumarsinghv alkynelinchpinstrategyfordrugpharmacophoreconjugationexperimentalandcomputationalrealizationofametaselectiveinversesonogashiracoupling
AT guins alkynelinchpinstrategyfordrugpharmacophoreconjugationexperimentalandcomputationalrealizationofametaselectiveinversesonogashiracoupling
AT patonr alkynelinchpinstrategyfordrugpharmacophoreconjugationexperimentalandcomputationalrealizationofametaselectiveinversesonogashiracoupling
AT maitid alkynelinchpinstrategyfordrugpharmacophoreconjugationexperimentalandcomputationalrealizationofametaselectiveinversesonogashiracoupling