A comprehensive RNA handling and transcriptomics guide for high-throughput processing of Plasmodium blood-stage samples.

A comprehensive RNA handling and transcriptomics guide for high-throughput processing of Plasmodium blood-stage samples.

BACKGROUND:<br>Sequencing technology advancements opened new opportunities to use transcriptomics for studying malaria pathology and epidemiology. Even though in recent years the study of whole parasite transcriptome proved to be essential in understanding parasite biology there is no compiled...

Descripció completa

Dades bibliogràfiques
Autors principals:	Kucharski, M, Tripathi, J, Nayak, S, Zhu, L, Wirjanata, G, van der Pluijm, RW, Dhorda, M, Dondorp, A, Bozdech, Z
Format:	Journal article
Idioma:	English
Publicat:	BioMed Central 2020

Ítems similars

A comprehensive RNA handling and transcriptomics guide for high-throughput processing of Plasmodium blood-stage samples
per: Kucharski, Michal, et al.
Publicat: (2021)

A comprehensive RNA handling and transcriptomics guide for high-throughput processing of Plasmodium blood-stage samples
per: Michal Kucharski, et al.
Publicat: (2020-10-01)

Short tandem repeat polymorphism in the promoter region of cyclophilin 19B drives its transcriptional upregulation and contributes to drug resistance in the malaria parasite Plasmodium falciparum
per: Kucharski, Michal, et al.
Publicat: (2023)

Short tandem repeat polymorphism in the promoter region of cyclophilin 19B drives its transcriptional upregulation and contributes to drug resistance in the malaria parasite Plasmodium falciparum.
per: Michal Kucharski, et al.
Publicat: (2023-01-01)

Triple artemisinin-based combination therapies for malaria – a new paradigm?
per: van der Pluijm, RW, et al.
Publicat: (2020)

Population genomics and transcriptomics of Plasmodium falciparum in Cambodia and Vietnam uncover key components of the artemisinin resistance genetic background
per: Nayak, S, et al.
Publicat: (2024)

Population genomics and transcriptomics of Plasmodium falciparum in Cambodia and Vietnam uncover key components of the artemisinin resistance genetic background
per: Nayak, Sourav, et al.
Publicat: (2025)

Population genomics and transcriptomics of Plasmodium falciparum in Cambodia and Vietnam uncover key components of the artemisinin resistance genetic background
per: Sourav Nayak, et al.
Publicat: (2024-12-01)

Antioxidant defense in <it>Plasmodium falciparum </it>– data mining of the transcriptome
per: Ginsburg Hagai, et al.
Publicat: (2004-07-01)

Artemisinin resistance in the malaria parasite, Plasmodium falciparum, originates from its initial transcriptional response
per: Zhu, L, et al.
Publicat: (2022)

Stochastic expression of invasion genes in Plasmodium falciparum schizonts
per: Jaishree Tripathi, et al.
Publicat: (2022-05-01)

Data mining of the transcriptome of <it>Plasmodium falciparum</it>: the pentose phosphate pathway and ancillary processes
per: Ginsburg Hagai, et al.
Publicat: (2005-03-01)

Histone 4 lysine 8 acetylation regulates proliferation and host–pathogen interaction in Plasmodium falciparum
per: Gupta, Archana P., et al.
Publicat: (2018)

Deploying triple artemisinin-based combination therapy (TACT) for malaria treatment in Africa: ethical and practical considerations
per: Tindana, P, et al.
Publicat: (2021)

The mechanism of artemisinin resistance of Plasmodium falciparum malaria parasites originates in their initial transcriptional response
per: Zhu, L, et al.
Publicat: (2021)

The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum.
per: Zbynek Bozdech, et al.
Publicat: (2003-10-01)

High-throughput sample handling and data collection at synchrotrons: embedding the ESRF into the high-throughput gene-to-structure pipeline.
per: Beteva, A, et al.
Publicat: (2006)

Integrated analysis of the Plasmodium species transcriptome
per: Hoo, Regina, et al.
Publicat: (2018)

Integrated analysis of the Plasmodium species transcriptome
per: Regina Hoo, et al.
Publicat: (2016-05-01)

The origins of malaria artemisinin resistance defined by a genetic and transcriptomic background
per: Zhu, L, et al.
Publicat: (2018)

New insights into the Plasmodium vivax transcriptome using RNA-Seq
per: Zhu, L, et al.
Publicat: (2016)

The origins of malaria artemisinin resistance defined by a genetic and transcriptomic background
per: Zhu, Lei, et al.
Publicat: (2019)

New insights into the plasmodium vivax transcriptome using RNA-Seq
per: Zhu, Lei, et al.
Publicat: (2018)

Identification and structural validation of purine nucleoside phosphorylase from Plasmodium falciparum as a target of MMV000848
per: Chung, Zara, et al.
Publicat: (2024)

The spread of artemisinin-resistant Plasmodium falciparum in the Greater Mekong Subregion: a molecular epidemiology observational study
per: Imwong, M, et al.
Publicat: (2017)

Artemisinin resistance in the malaria parasite, Plasmodium falciparum, originates from its initial transcriptional response
per: Zhu, Lei, et al.
Publicat: (2022)

Artemisinin resistance in the malaria parasite, Plasmodium falciparum, originates from its initial transcriptional response
per: Lei Zhu, et al.
Publicat: (2022-03-01)

Effective preparation of Plasmodium vivax field isolates for high-throughput whole genome sequencing
per: Auburn, S, et al.
Publicat: (2013)

The transcriptome of Plasmodium vivax reveals divergence and diversity of transcriptional regulation in malaria parasites.
per: Bozdech, Z, et al.
Publicat: (2008)

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
per: Hall, N, et al.
Publicat: (2005)

Modulation of triple artemisinin-based combination therapy pharmacodynamics by Plasmodium falciparum genotype
per: Ansbro, MR, et al.
Publicat: (2020)

Effective preparation of Plasmodium vivax field isolates for high-throughput whole genome sequencing.
per: Sarah Auburn, et al.
Publicat: (2013-01-01)

High-throughput transcriptomics
per: Nunzio D’Agostino, et al.
Publicat: (2022-11-01)

Deep sampling of the <it>Palomero </it>maize transcriptome by a high throughput strategy of pyrosequencing
per: Herrera-Estrella Luis, et al.
Publicat: (2009-07-01)

Persistent Plasmodium falciparum and Plasmodium vivax infections in a western Cambodian population: implications for prevention, treatment and elimination strategies.
per: Tripura, R, et al.
Publicat: (2016)

In vivo assessments to detect antimalarial resistance
per: Dhorda, M, et al.
Publicat: (2019)

Are national treatment guidelines for falciparum malaria in line with WHO recommendations and is antimalarial resistance taken into consideration? – A review of guidelines in non-endemic countries
per: Visser, MT, et al.
Publicat: (2022)

An AGV scheduling and routing system for high-throughput container handling
per: Yu, Xin Guo.
Publicat: (2009)

Comprehensive guide for epigenetics and transcriptomics data quality control
per: Arianna Comendul, et al.
Publicat: (2025-03-01)

Ten-year persistence and evolution of Plasmodium falciparum antifolate and anti-sulfonamide resistance markers pfdhfr and pfdhps in three Asian countries
per: Srisutham, S, et al.
Publicat: (2022)