Introducing improved structural properties and salt dependence into a coarse-grained model of DNA.
We introduce an extended version of oxDNA, a coarse-grained model of deoxyribonucleic acid (DNA) designed to capture the thermodynamic, structural, and mechanical properties of single- and double-stranded DNA. By including explicit major and minor grooves and by slightly modifying the coaxial stacki...
Main Authors: | , , , , , , , , , , |
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Format: | Journal article |
Language: | English |
Published: |
AIP Publishing
2015
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