Practical approaches for detecting selection in microbial genomes

Practical approaches for detecting selection in microbial genomes

Microbial genome evolution is shaped by a variety of selective pressures. Understanding how these processes occur can help to address important problems in microbiology by explaining observed differences in phenotypes, including virulence and resistance to antibiotics. Greater access to whole-genome...

Cur síos iomlán

Sonraí bibleagrafaíochta
Príomhchruthaitheoirí:	Hedge, J, Wilson, D
Formáid:	Journal article
Teanga:	English
Foilsithe / Cruthaithe:	Public Library of Science 2016

Míreanna comhchosúla

Practical Approaches for Detecting Selection in Microbial Genomes.
de réir: Jessica Hedge, et al.
Foilsithe / Cruthaithe: (2016-02-01)

Bacterial phylogenetic reconstruction from whole genomes is robust to recombination but demographic inference is not
de réir: Hedge, J, et al.
Foilsithe / Cruthaithe: (2014)

Bacterial Phylogenetic Reconstruction from Whole Genomes Is Robust to Recombination but Demographic Inference Is Not
de réir: Jessica Hedge, et al.
Foilsithe / Cruthaithe: (2014-12-01)

Big data approaches to microbial genomics
de réir: Arning, N
Foilsithe / Cruthaithe: (2022)

Abiotic selection of microbial genome size in the global ocean
de réir: David K. Ngugi, et al.
Foilsithe / Cruthaithe: (2023-03-01)

Genomic signatures of sex, selection and speciation in the microbial world
de réir: Shapiro, B. Jesse (Benjamin Jesse)
Foilsithe / Cruthaithe: (2011)

Phylogenetic detection of conserved gene clusters in microbial genomes
de réir: Anton Brian P, et al.
Foilsithe / Cruthaithe: (2005-10-01)

Interpreting Microbial Biosynthesis in the Genomic Age: Biological and Practical Considerations
de réir: Ian J. Miller, et al.
Foilsithe / Cruthaithe: (2017-06-01)

Detecting positive selection in the genome
de réir: Tom R. Booker, et al.
Foilsithe / Cruthaithe: (2017-10-01)

Approaches for in silico finishing of microbial genome sequences
de réir: Frederico Schmitt Kremer, et al.

Novel phylogenetic approaches to problems in microbial genomics
de réir: David, Lawrence A. (Lawrence Anthony)
Foilsithe / Cruthaithe: (2011)

A new approach for using genome scans to detect recent positive selection in the human genome.
de réir: Kun Tang, et al.
Foilsithe / Cruthaithe: (2007-07-01)

On detecting selective sweeps using single genomes
de réir: Priyanka eSinha, et al.
Foilsithe / Cruthaithe: (2011-12-01)

Microbial genome sequencing and pathogenesis.
de réir: Tang, C, et al.
Foilsithe / Cruthaithe: (1998)

GenomeViz: visualizing microbial genomes
de réir: Chakraborty Trinad, et al.
Foilsithe / Cruthaithe: (2004-12-01)

A hybrid clustering approach to recognition of protein families in 114 microbial genomes
de réir: Gogarten J Peter, et al.
Foilsithe / Cruthaithe: (2004-04-01)

Microbial functional genomics /
de réir: Zhou, Jizhong, 1959-
Foilsithe / Cruthaithe: (2004)

Microbial genomics and drug discovery /
de réir: Dougherty, Thomas J. (Thomas John), 1950-, et al.
Foilsithe / Cruthaithe: (2003)

Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement.
de réir: Bruce J Walker, et al.
Foilsithe / Cruthaithe: (2014-01-01)

Best Practices for Evaluating Single Nucleotide Variant Calling Methods for Microbial Genomics
de réir: Nathan eOlson, et al.
Foilsithe / Cruthaithe: (2015-07-01)

Editorial: Microbial comparative genomics and pangenomics: new tools, approaches and insights into gene and genome evolution
de réir: Digvijay Verma, et al.
Foilsithe / Cruthaithe: (2024-10-01)

A New Genome-to-Genome Comparison Approach for Large-Scale Revisiting of Current Microbial Taxonomy
de réir: Ming-Hsin Tsai, et al.
Foilsithe / Cruthaithe: (2019-06-01)

Pharmaceutical products microbial contamination; approaches of detection and avoidance
de réir: Zahraa Hashim, et al.
Foilsithe / Cruthaithe: (2025-02-01)

Assessment the effect of genomic selection and detection of selective signature in broilers
de réir: Xiaodong Tan, et al.
Foilsithe / Cruthaithe: (2022-06-01)

Screening for oral cancers: Future perspectives
de réir: Nidarsh D. Hedge, et al.
Foilsithe / Cruthaithe: (2018-01-01)

Strain-level profiling of viable microbial community by selective single-cell genome sequencing
de réir: Masahito Hosokawa, et al.
Foilsithe / Cruthaithe: (2022-03-01)

Dynamic probe selection for studying microbial transcriptome with high-density genomic tiling microarrays
de réir: Chen Tsute, et al.
Foilsithe / Cruthaithe: (2010-02-01)

Genome-wide detection and characterization of positive selection in human populations.
de réir: Sabeti, P, et al.
Foilsithe / Cruthaithe: (2007)

Comparative Genomics and Understanding of Microbial Biology
de réir: Claire M. Fraser, et al.
Foilsithe / Cruthaithe: (2000-10-01)

Detecting recent positive selection in the human genome from haplotype structure.
de réir: Sabeti, P, et al.
Foilsithe / Cruthaithe: (2002)

Genomic selection - Revolutionary breeding practice in Domestic animals
de réir: Manjit Panigrahi, et al.
Foilsithe / Cruthaithe: (2012-01-01)

The need for research-based tools for personnel selection and assessment in the forensic sciences
de réir: Randall D. Spain, et al.
Foilsithe / Cruthaithe: (2022-01-01)

From Microbial Genomics to Metagenomics
de réir: Ravi Kant, et al.
Foilsithe / Cruthaithe: (2020-01-01)

Microbial genomics challenge Darwin
de réir: Didier eRaoult, et al.
Foilsithe / Cruthaithe: (2012-10-01)

Microbial genomics and the periodic table/
de réir: Wackett, Lawrence P., et al.

Genomics and evolution of microbial eukaryotes /
de réir: Katz, Laura A., et al.
Foilsithe / Cruthaithe: (2006)

Specialized microbial databases for inductive exploration of microbial genome sequences
de réir: Cabau Cédric, et al.
Foilsithe / Cruthaithe: (2005-02-01)

Detecting positive selection from genome scans of linkage disequilibrium
de réir: Rogers Alan R, et al.
Foilsithe / Cruthaithe: (2010-01-01)

Detecting co-selection through excess linkage disequilibrium in bacterial genomes
de réir: Mallawaarachchi, S, et al.
Foilsithe / Cruthaithe: (2024)

The importance of genome sequence quality to microbial comparative genomics
de réir: Theo H. M. Smits
Foilsithe / Cruthaithe: (2019-08-01)