HIV-1 full-genome phylogenetics of generalized epidemics in sub-Saharan Africa: impact of missing nucleotide characters in next-generation sequences.

To characterize HIV-1 transmission dynamics in regions where the burden of HIV-1 is greatest, the 'Phylogenetics and Networks for Generalised HIV Epidemics in Africa' consortium (PANGEA-HIV) is sequencing full-genome viral isolates from across sub-Saharan Africa. We report the first 3,985...

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Bibliographic Details
Main Authors:	Ratmann, O, Wymant, C, Colijn, C, Danaviah, S, Essex, M, Frost, S, Gall, A, Gaiseitsiwe, S, Grabowski, M, Gray, R, Guindon, S, von Haeseler, A, Kaleebu, P, Kendall, M, Kozlov, A, Manasa, J, Minh, B, Moyo, S, Novitsky, V, Nsubuga, R, Pillay, S, Quinn, T, Serwadda, D, Ssemwanga, D, Stamatakis, A, Trifinopoulos, J, Wawer, M, Leigh Brown, A, de Oliveira, T, Kellam, P, Pillay, D, Fraser, C
Format:	Journal article
Language:	English
Published:	Mary Ann Liebert 2017

HIV-1 full-genome phylogenetics of generalized epidemics in sub-Saharan Africa: impact of missing nucleotide characters in next-generation sequences.

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