Efficient ancestry and mutation simulation with msprime 1.0

Efficient ancestry and mutation simulation with msprime 1.0

Stochastic simulation is a key tool in population genetics, since the models involved are often analytically intractable and simulation is usually the only way of obtaining ground-truth data to evaluate inferences. Because of this, a large number of specialized simulation programs have been develope...

書誌詳細
主要な著者:	Baumdicker, F, Bisschop, G, Goldstein, D, Zhu, S, Jeffery, B, Wohns, AW, Wong, Y, Kelleher, J
フォーマット:	Journal article
言語:	English
出版事項:	Oxford University Press 2021

類似資料

Coalescent simulation with msprime
著者:: Kelleher, J, 等
出版事項: (2020)

A unified genealogy of modern and ancient genomes
著者:: Wohns, AW, 等
出版事項: (2022)

A general and efficient representation of ancestral recombination graphs
著者:: Wong, HY, 等
出版事項: (2024)

Inferring whole-genome histories in large population datasets
著者:: Kelleher, J, 等
出版事項: (2019)

tstrait: a quantitative trait simulator for ancestral recombination graphs
著者:: Tagami, D, 等
出版事項: (2024)

Trans-Ancestry Mutation Landscape of Hepatoblastoma Genomes in Children
著者:: Jie Liu, 等
出版事項: (2021-04-01)

Spread of pedigree versus genetic ancestry in spatially distributed populations.
著者:: Kelleher, J, 等
出版事項: (2015)

Neural networks for self-adjusting mutation rate estimation when the recombination rate is unknown.
著者:: Klara Elisabeth Burger, 等
出版事項: (2022-08-01)

BRAF and TERT mutations in papillary thyroid cancer patients of Latino ancestry
著者:: Ana P Estrada-Flórez, 等
出版事項: (2019-09-01)

Fishing for ancestry
著者:: Hannah Brunsdon, 等
出版事項: (2018-08-01)

What is ancestry?
著者:: Iain Mathieson, 等
出版事項: (2020-03-01)

Editorial: Synthetic Microbial Ecology
著者:: Thomas Brüls, 等
出版事項: (2021-11-01)

Salt and Brazilian ancestry
著者:: Rodrigo Díaz Olmos, 等

On “Ancestry” by Konstantin Terziev
著者:: Nikolay Daskalov; Yarmila Daskalova
出版事項: (2021-12-01)

Mapping the ancestry of primates
著者:: Ignacio Martínez, 等
出版事項: (2020-03-01)

The common ancestry of life
著者:: Wolf Yuri I, 等
出版事項: (2010-11-01)

Surnames and ancestry in Brazil.
著者:: Leonardo Monasterio
出版事項: (2017-01-01)

LPJ-GM 1.0: simulating migration efficiently in a dynamic vegetation model
著者:: V. Lehsten, 等
出版事項: (2019-03-01)

Assessing the reliability of eBURST using simulated populations with known ancestry
著者:: Connor Thomas R, 等
出版事項: (2007-04-01)

AncestryPainter: A Graphic Program for Displaying Ancestry Composition of Populations and Individuals
著者:: Qidi Feng, 等
出版事項: (2018-10-01)

Selection of Optimal Ancestry Informative Markers for Classification and Ancestry Proportion Estimation in Pigs
著者:: Zuoxiang Liang, 等
出版事項: (2019-03-01)

Expansion of the Spinocerebellar ataxia type 10 (SCA10) repeat in a patient with Sioux Native American ancestry.
著者:: Khalaf Bushara, 等
出版事項: (2013-01-01)

Ancestry informative markers single nucleotide polymorphisms panel for ancestry estimation in the Malay population
著者:: Yahya, Padillah
出版事項: (2021)

Deep ancestry of Bornean hunter-gatherers supports long-term local ancestry dynamics
著者:: Pradiptajati Kusuma, 等
出版事項: (2023-11-01)

Ancestry-associated transcriptomic profiles of breast cancer in patients of African, Arab, and European ancestry
著者:: Jessica Roelands, 等
出版事項: (2021-02-01)

Extensive set of African ancestry-informative markers (AIMs) to study ancestry and population health
著者:: Samantha Boudeau, 等
出版事項: (2023-02-01)

PRState: Incorporating genetic ancestry in prostate cancer risk scores for men of African ancestry
著者:: Meghana S. Pagadala, 等
出版事項: (2022-12-01)

Straightforward inference of ancestry and admixture proportions through ancestry-informative insertion deletion multiplexing.
著者:: Rui Pereira, 等
出版事項: (2012-01-01)

Assessment of the effectiveness of the EUROFORGEN NAME and Precision ID Ancestry panel markers for ancestry investigations
著者:: D. Truelsen, 等
出版事項: (2021-09-01)

Multiethnic meta-analysis identifies ancestry-specific and cross-ancestry loci for pulmonary function
著者:: Annah B. Wyss, 等
出版事項: (2018-07-01)

Description and validation of the Simple, Efficient, Dynamic, Global, Ecological Simulator (SEDGES v.1.0)
著者:: P. Paiewonsky, 等
出版事項: (2018-03-01)

Ancestry.com’s Race Stories
著者:: Anna Robinson-Sweet
出版事項: (2021-02-01)

Haplotype analysis for Irish ancestry
著者:: Robert Whiting, 等
出版事項: (2020-10-01)

Genetic geographies: the trouble with ancestry
著者:: Robin Renée Robinson
出版事項: (2018-01-01)

Crinoid ancestry without blastozoans
著者:: Thomas E. Guensburg, 等
出版事項: (2016-06-01)

Inference of transposable element ancestry.
著者:: Aaron C Wacholder, 等
出版事項: (2014-08-01)

Peptide ancestry informative markers in uterine neoplasms from women of European, African, and Asian ancestry
著者:: Nicholas W. Bateman, 等
出版事項: (2022-01-01)

Frequency of TNFA, INFG, and IL10 Gene Polymorphisms and Their Association with Malaria Vivax and Genomic Ancestry
著者:: Adriana Antônia da Cruz Furini, 等
出版事項: (2016-01-01)

Discerning the ancestry of European Americans in genetic association studies
著者:: Price, A, 等
出版事項: (2008)

Discerning the ancestry of European Americans in genetic association studies.
著者:: Price, A, 等
出版事項: (2008)