Nonspecific bridging-induced attraction drives clustering of DNA-binding proteins and genome organization.
Molecular dynamics simulations are used to model proteins that diffuse to DNA, bind, and dissociate; in the absence of any explicit interaction between proteins, or between templates, binding spontaneously induces local DNA compaction and protein aggregation. Small bivalent proteins form into rows [...
Hauptverfasser: | Brackley, C, Taylor, S, Papantonis, A, Cook, P, Marenduzzo, D |
---|---|
Format: | Journal article |
Sprache: | English |
Veröffentlicht: |
2013
|
Ähnliche Einträge
-
The depletion attraction: an underappreciated force driving cellular organization.
von: Marenduzzo, D, et al.
Veröffentlicht: (2006) -
The depletion attraction: an underappreciated force driving cellular organization
von: Marenduzzo, D, et al.
Veröffentlicht: (2006) -
Ephemeral protein binding to DNA shapes stable nuclear bodies and chromatin domains.
von: Brackley, C, et al.
Veröffentlicht: (2017) -
Simulated binding of transcription factors to active and inactive regions folds human chromosomes into loops, rosettes and topological domains
von: Brackley, C, et al.
Veröffentlicht: (2016) -
Complex small-world regulatory networks emerge from the 3D organisation of the human genome
von: C. A. Brackley, et al.
Veröffentlicht: (2021-10-01)