ClonalFrameML: efficient inference of recombination in whole bacterial genomes

Recombination is an important evolutionary force in bacteria, but it remains challenging to reconstruct the imports that occurred in the ancestry of a genomic sample. Here we present ClonalFrameML, which uses maximum likelihood inference to simultaneously detect recombination in bacterial genomes an...

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Detalles Bibliográficos
Main Authors: Didelot, X, Wilson, D
Formato: Journal article
Idioma:English
Publicado: Public Library of Science 2015