emClarity: software for high-resolution cryo-electron tomography and subtomogram averaging

emClarity: software for high-resolution cryo-electron tomography and subtomogram averaging

Macromolecular complexes are intrinsically flexible and often challenging to purify for structure determination by single-particle cryo-electron microscopy (cryo-EM). Such complexes can be studied by cryo-electron tomography (cryo-ET) combined with subtomogram alignment and classification, which in...

Disgrifiad llawn

Manylion Llyfryddiaeth
Prif Awduron:	Himes, B, Zhang, P
Fformat:	Journal article
Iaith:	English
Cyhoeddwyd:	Springer Nature 2018

Eitemau Tebyg

Advances in cryo-electron tomography and subtomogram averaging and classification
gan: Zhang, P
Cyhoeddwyd: (2019)

Resolving macromolecular structures from electron cryo-tomography data using subtomogram averaging in RELION
gan: Bharat, TAM, et al.
Cyhoeddwyd: (2016)

CryoEM-based hybrid modeling approaches for structure determination.
gan: Cassidy, C, et al.
Cyhoeddwyd: (2017)

High-resolution structural analysis of a DNA nanostructure by cryoEM.
gan: Kato, T, et al.
Cyhoeddwyd: (2009)

The democratization of cryo-EM
gan: Stuart, D, et al.
Cyhoeddwyd: (2016)

Algorithmic and infrastructural software development for cryo electron tomography
gan: Frosio, T
Cyhoeddwyd: (2023)

Cryo-EM at ACA 2022
gan: Subramaniam, Sriram, et al.
Cyhoeddwyd: (2022)

Image clarity : high-resolution photography /
gan: 450010 Williams, John B.
Cyhoeddwyd: (1990)

Template Matching, Alignment and Averaging of Sub-Tomograms in Electron Cryo-Tomography Reconstructions using Jsubtomo
gan: Huiskonen, J
Cyhoeddwyd: (2014)

Cryo-EM structure of the chloroplast ribosome
gan: Tofayel Ahmed
Cyhoeddwyd: (2018)

Accurate model annotation of a near-atomic resolution cryo-EM map
gan: Hryc, Corey F., et al.
Cyhoeddwyd: (2017)

Cellular electron cryo tomography and in situ sub-volume averaging reveal the context of microtubule-based processes.
gan: Grange, M, et al.
Cyhoeddwyd: (2016)

Cellular electron cryo tomography and in situ sub-volume averaging reveal the context of microtubule-based processes
gan: Grange, M, et al.
Cyhoeddwyd: (2016)

Cryo-EM structure of the Mycobacterium smegmatis ribosome
gan: Mishra, Satabdi
Cyhoeddwyd: (2019)

CryoDRGN: reconstruction of heterogeneous cryo-EM structures using neural networks
gan: Zhong, Ellen D, et al.
Cyhoeddwyd: (2021)

Topaz-Denoise: general deep denoising models for cryoEM and cryoET
gan: Bepler, Tristan, et al.
Cyhoeddwyd: (2021)

Topaz-Denoise: general deep denoising models for cryoEM and cryoET
gan: Belpler, Tristan, et al.
Cyhoeddwyd: (2022)

Structure and dynamics of the E. coli chemotaxis core signaling complex by cryo-electron tomography and molecular simulations
gan: Cassidy, C, et al.
Cyhoeddwyd: (2020)

Beyond structures of highly symmetric purified viral capsids by cryo-EM
gan: Stass, R, et al.
Cyhoeddwyd: (2018)

Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
gan: Matzov, Donna, et al.
Cyhoeddwyd: (2021)

Zernike Phase Contrast Cryo-Electron Microscopy and Tomography for Structure Determination at Nanometer and Subnanometer Resolutions
gan: Murata, Kazuyoshi, et al.
Cyhoeddwyd: (2015)

Validated near-atomic resolution structure of bacteriophage epsilon15 derived from cryo-EM and modeling
gan: Baker, Matthew L., et al.
Cyhoeddwyd: (2014)

The cryo-EM structure of the SNX-BAR Mvp1 tetramer
gan: Sun, D, et al.
Cyhoeddwyd: (2020)

Three-Dimensional Structures of Translating Ribosomes by Cryo-EM
gan: Gilbert, R, et al.
Cyhoeddwyd: (2004)

Three-dimensional structures of translating ribosomes by Cryo-EM.
gan: Gilbert, R, et al.
Cyhoeddwyd: (2004)

The architecture of inactivated SARS-CoV-2 with postfusion spikes revealed by cryo-EM and cryo-ET
gan: Liu, C, et al.
Cyhoeddwyd: (2020)

High-resolution icosahedral reconstruction: fulfilling the promise of cryo-electron microscopy.
gan: Mancini, E, et al.
Cyhoeddwyd: (1997)

Uncovering structural ensembles from single-particle cryo-EM data using cryoDRGN
gan: Kinman, Laurel F, et al.
Cyhoeddwyd: (2022)

Conformational landscape of the yeast SAGA complex as revealed by cryo-EM
gan: Vasyliuk, Diana, et al.
Cyhoeddwyd: (2022)

Effect of cardiolipin on aquaporin Z: a cryo-EM study
gan: Leo, Zhenn Yi
Cyhoeddwyd: (2023)

Insights into POT1 structural dynamics revealed by cryo-EM
gan: Smith, Emmanuel W., et al.
Cyhoeddwyd: (2022)

Cryo-EM structure of the Mycobacterium abscessus F1-ATPase
gan: Wong, Chui Fann, et al.
Cyhoeddwyd: (2023)

Design of a molecular support for cryo-EM structure determination
gan: Martin, T, et al.
Cyhoeddwyd: (2016)

Improvements in electron cryo-tomography towards understanding virus surfing
gan: Prazak, V
Cyhoeddwyd: (2019)

Cryo electron tomography of native HIV-1 budding sites.
gan: Carlson, L, et al.
Cyhoeddwyd: (2010)

Integrative imaging and electron cryo-tomography of viral transport mechanisms
gan: Grange, M
Cyhoeddwyd: (2016)

Cryo-SOFI enabling low-dose super-resolution correlative light and electron cryo-microscopy
gan: Moser, F, et al.
Cyhoeddwyd: (2019)

3.3-Å resolution cryo-EM structure of human ribonucleotide reductase with substrate and allosteric regulators bound
gan: Brignole, Edward J, et al.
Cyhoeddwyd: (2018)

Compressive cryo FIB-SEM tomography
gan: Nicholls, D, et al.
Cyhoeddwyd: (2023)

Differentiation and characterization of excitatory and inhibitory synapses by cryo-electron tomography and correlative microscopy
gan: Tao, C, et al.
Cyhoeddwyd: (2018)