emClarity: software for high-resolution cryo-electron tomography and subtomogram averaging

emClarity: software for high-resolution cryo-electron tomography and subtomogram averaging

Macromolecular complexes are intrinsically flexible and often challenging to purify for structure determination by single-particle cryo-electron microscopy (cryo-EM). Such complexes can be studied by cryo-electron tomography (cryo-ET) combined with subtomogram alignment and classification, which in...

Disgrifiad llawn

Manylion Llyfryddiaeth
Prif Awduron:	Himes, B, Zhang, P
Fformat:	Journal article
Iaith:	English
Cyhoeddwyd:	Springer Nature 2018

Eitemau Tebyg

Advances in cryo-electron tomography and subtomogram averaging and classification
gan: Zhang, P
Cyhoeddwyd: (2019)

Protocol for subtomogram averaging of helical filaments in cryo-electron tomography
gan: Xiaojie Zhang, et al.
Cyhoeddwyd: (2024-09-01)

Streamlined structure determination by cryo-electron tomography and subtomogram averaging using TomoBEAR
gan: Nikita Balyschew, et al.
Cyhoeddwyd: (2023-10-01)

Resolving macromolecular structures from electron cryo-tomography data using subtomogram averaging in RELION
gan: Bharat, TAM, et al.
Cyhoeddwyd: (2016)

Author Correction: Streamlined structure determination by cryo-electron tomography and subtomogram averaging using TomoBEAR
gan: Nikita Balyschew, et al.
Cyhoeddwyd: (2024-07-01)

Characterization of Microtubule Lattice Heterogeneity by Segmented Subtomogram Averaging
gan: Clément Bousquet, et al.
Cyhoeddwyd: (2023-07-01)

Algorithmic and infrastructural software development for cryo electron tomography
gan: Frosio, T
Cyhoeddwyd: (2023)

Image clarity : high-resolution photography /
gan: 450010 Williams, John B.
Cyhoeddwyd: (1990)

Template Matching, Alignment and Averaging of Sub-Tomograms in Electron Cryo-Tomography Reconstructions using Jsubtomo
gan: Huiskonen, J
Cyhoeddwyd: (2014)

Cellular electron cryo tomography and in situ sub-volume averaging reveal the context of microtubule-based processes.
gan: Grange, M, et al.
Cyhoeddwyd: (2016)

Cellular electron cryo tomography and in situ sub-volume averaging reveal the context of microtubule-based processes
gan: Grange, M, et al.
Cyhoeddwyd: (2016)

Cryo-Electron Tomography of <em>Candida glabrata</em> Plasma Membrane Proteins
gan: Cristina Jiménez-Ortigosa, et al.
Cyhoeddwyd: (2021-02-01)

CryoEM-based hybrid modeling approaches for structure determination.
gan: Cassidy, C, et al.
Cyhoeddwyd: (2017)

Scaffold-enabled high-resolution cryo-EM structure determination of RNA
gan: Daniel B. Haack, et al.
Cyhoeddwyd: (2025-01-01)

Structure and dynamics of the E. coli chemotaxis core signaling complex by cryo-electron tomography and molecular simulations
gan: Cassidy, C, et al.
Cyhoeddwyd: (2020)

CryoTRANS: predicting high-resolution maps of rare conformations from self-supervised trajectories in cryo-EM
gan: Xiao Fan, et al.
Cyhoeddwyd: (2024-08-01)

Cryo-electron tomography pipeline for plasma membranes
gan: Willy W. Sun, et al.
Cyhoeddwyd: (2025-01-01)

High-resolution structural analysis of a DNA nanostructure by cryoEM.
gan: Kato, T, et al.
Cyhoeddwyd: (2009)

Zernike Phase Contrast Cryo-Electron Microscopy and Tomography for Structure Determination at Nanometer and Subnanometer Resolutions
gan: Murata, Kazuyoshi, et al.
Cyhoeddwyd: (2015)

Minimizing ice contamination during specimen preparation for cryo-soft X-ray tomography and cryo-electron tomography
gan: Chia-Chun Hsieh, et al.
Cyhoeddwyd: (2024-12-01)

High-confidence 3D template matching for cryo-electron tomography
gan: Sergio Cruz-León, et al.
Cyhoeddwyd: (2024-05-01)

Non-averaged single-molecule tertiary structures reveal RNA self-folding through individual-particle cryo-electron tomography
gan: Jianfang Liu, et al.
Cyhoeddwyd: (2024-10-01)

High-resolution icosahedral reconstruction: fulfilling the promise of cryo-electron microscopy.
gan: Mancini, E, et al.
Cyhoeddwyd: (1997)

Streamlining segmentation of cryo-electron tomography datasets with Ais
gan: Mart GF Last, et al.
Cyhoeddwyd: (2024-12-01)

Deep orientation estimation of macromolecules in cryo-electron tomography
gan: Hajarolasvadi Noushin, et al.
Cyhoeddwyd: (2024-01-01)

Cryo-focused Ion Beam Sample Preparation for Imaging Vitreous Cells by Cryo-electron Tomography
gan: Miroslava Schaffer, et al.
Cyhoeddwyd: (2015-09-01)

Determining Protein Secondary Structures in Heterogeneous Medium-Resolution Cryo-EM Images Using CryoSSESeg
gan: Salim Sazzed
Cyhoeddwyd: (2024-06-01)

Cryo-SOFI enabling low-dose super-resolution correlative light and electron cryo-microscopy
gan: Moser, F, et al.
Cyhoeddwyd: (2019)

High-resolution cryo-EM structures of the E. coli hemolysin ClyA oligomers.
gan: Wei Peng, et al.
Cyhoeddwyd: (2019-01-01)

Glacios 2 Cryo-TEM and Smart EPU Software streamline Cryo-EM for drug design with higher throughput
gan: Koh Adrian, et al.
Cyhoeddwyd: (2024-01-01)

Improvements in electron cryo-tomography towards understanding virus surfing
gan: Prazak, V
Cyhoeddwyd: (2019)

Cryo electron tomography of native HIV-1 budding sites.
gan: Carlson, L, et al.
Cyhoeddwyd: (2010)

Integrative imaging and electron cryo-tomography of viral transport mechanisms
gan: Grange, M
Cyhoeddwyd: (2016)

A cryo-electron tomography study of ciliary rootlet organization
gan: Chris van Hoorn, et al.
Cyhoeddwyd: (2024-12-01)

MPicker: visualizing and picking membrane proteins for cryo-electron tomography
gan: Xiaofeng Yan, et al.
Cyhoeddwyd: (2025-01-01)

An image processing pipeline for electron cryo‐tomography in RELION‐5
gan: Alister Burt, et al.
Cyhoeddwyd: (2024-11-01)

High-resolution cryo-EM of the human CDK-activating kinase for structure-based drug design
gan: Victoria I. Cushing, et al.
Cyhoeddwyd: (2024-03-01)

Parakeet: a digital twin software pipeline to assess the impact of experimental parameters on tomographic reconstructions for cryo-electron tomography
gan: Parkhurst, JM, et al.
Cyhoeddwyd: (2021)

Core components of bacterial protein secretion systems revealed at high resolution by cryo-electron microscopy
gan: Deme, J, et al.
Cyhoeddwyd: (2018)

Towards correlative super-resolution fluorescence and electron cryo-microscopy.
gan: Wolff, G, et al.
Cyhoeddwyd: (2016)