A comparison of structural variant calling from short-read and nanopore-based whole-genome sequencing using optical genome mapping as a benchmark
The identification of structural variants (SVs) in genomic data represents an ongoing challenge because of difficulties in reliable SV calling leading to reduced sensitivity and specificity. We prepared high-quality DNA from 9 parent–child trios, who had previously undergone short-read whole-genome...
Hoofdauteurs: | Pei, Y, Tanguy, M, Giess, A, Dixit, A, Wilson, LC, Gibbons, RJ, Twigg, SRF, Elgar, G, Wilkie, AOM |
---|---|
Formaat: | Journal article |
Taal: | English |
Gepubliceerd in: |
MDPI
2024
|
Gelijkaardige items
-
Whole Genome Assembly of Human Papillomavirus by Nanopore Long-Read Sequencing
door: Shuaibing Yang, et al.
Gepubliceerd in: (2022-01-01) -
Review of recurrently mutated genes in craniosynostosis supports expansion of diagnostic gene panels
door: Tooze, RS, et al.
Gepubliceerd in: (2023) -
Benchmarking Oxford Nanopore read alignment‐based insertion and deletion detection in crop plant genomes
door: Gözde Yildiz, et al.
Gepubliceerd in: (2023-06-01) -
Systematic benchmarking of nanopore Q20+ kit in SARS-CoV-2 whole genome sequencing
door: Junhong Luo, et al.
Gepubliceerd in: (2022-10-01) -
Benchmarking of Nanopore R10.4 and R9.4.1 flow cells in single-cell whole-genome amplification and whole-genome shotgun sequencing
door: Ying Ni, et al.
Gepubliceerd in: (2023-01-01)