ReadItAndKeep: rapid decontamination of SARS-CoV-2 sequencing reads

Viral sequence data from clinical samples frequently contain human contamination, which must be removed prior to sharing for legal and ethical reasons. To enable host read removal for SARS-CoV-2 sequencing data on low-specification laptops, we developed ReadItAndKeep, a fast lightweight tool for Ill...

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Bibliographic Details
Main Authors: Hunt, M, Swann, J, Constantinides, B, Fowler, PW, Iqbal, Z
Format: Internet publication
Language:English
Published: bioRxiv 2022