Naturally processed HLA class II peptides reveal highly conserved immunogenic flanking region sequence preferences that reflect antigen processing rather than peptide-MHC interactions.

MHC class II heterodimers bind peptides 12-20 aa in length. The peptide flanking residues (PFRs) of these ligands extend from a central binding core consisting of nine amino acids. Increasing evidence suggests that the PFRs can alter the immunogenicity of T cell epitopes. We have previously noted th...

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Bibliographic Details
Main Authors: Godkin, A, Smith, K, Willis, A, Tejada-Simon, M, Zhang, J, Elliott, T, Hill, A
Format: Journal article
Language:English
Published: 2001