Genomic analysis of respiratory syncytial virus infections in households and utility in inferring who infects the infant

Genomic analysis of respiratory syncytial virus infections in households and utility in inferring who infects the infant

Infants (under 1-year-old) are at most risk of life threatening respiratory syncytial virus (RSV) disease. RSV epidemiological data alone has been insufficient in defining who acquires infection from whom (WAIFW) within households. We investigated RSV genomic variation within and between infected in...

Fuld beskrivelse

Bibliografiske detaljer
Main Authors:	Agoti, CN, Phan, MVT, Munywoki, PK, Githinji, G, Medley, GF, Cane, PA, Kellam, P, Cotten, M, Nokes, DJ
Format:	Journal article
Sprog:	English
Udgivet:	Springer Nature 2019

Lignende værker

Transmission patterns and evolution of respiratory syncytial virus in a community outbreak identified by genomic analysis
af: Agoti, CN, et al.
Udgivet: (2017)

Model-based estimates of transmission of respiratory syncytial virus within households
af: Ivy K. Kombe, et al.
Udgivet: (2019-06-01)

Integrating epidemiological and genetic data with different sampling intensities into a dynamic model of respiratory syncytial virus transmission
af: Ivy K. Kombe, et al.
Udgivet: (2021-01-01)

Quantification and determinants of the amount of respiratory syncytial virus (RSV) shed using real time PCR data from a longitudinal household study [version 2; referees: 2 approved, 2 approved with reservations]
af: Miriam Wathuo, et al.
Udgivet: (2017-03-01)

Quantification and determinants of the amount of respiratory syncytial virus (RSV) shed using real time PCR data from a longitudinal household study [version 1; referees: 2 approved, 1 approved with reservations]
af: Miriam Wathuo, et al.
Udgivet: (2016-12-01)

Evaluating the performance of tools used to call minority variants from whole genome short-read data.
af: Said Mohammed, K, et al.
Udgivet: (2018)

Incidence and severity of respiratory syncytial virus pneumonia in rural Kenyan children identified through hospital surveillance.
af: Nokes, D, et al.
Udgivet: (2009)

Respiratory syncytial virus epidemiology in a birth cohort from Kilifi district, Kenya: infection during the first year of life
af: Nokes, J, et al.
Udgivet: (2004)

Respiratory syncytial virus epidemiology in a birth cohort from Kilifi district, Kenya: infection during the first year of life.
af: Nokes, D, et al.
Udgivet: (2004)

Respiratory syncytial virus infection and disease in infants and young children observed from birth in Kilifi district, Kenya
af: Nokes, D, et al.
Udgivet: (2008)

Respiratory syncytial virus infection and disease in infants and young children observed from birth in Kilifi District, Kenya.
af: Nokes, D, et al.
Udgivet: (2008)

Understanding the transmission dynamics of respiratory syncytial virus using multiple time series and nested models
af: White, LJ, et al.
Udgivet: (2006)

Identification of missed viruses by metagenomic sequencing of clinical respiratory samples from Kenya
af: My V. T. Phan, et al.
Udgivet: (2022-01-01)

Rapid Spread and Diversification of Respiratory Syncytial Virus Genotype ON1, Kenya
af: Charles N. Agoti, et al.
Udgivet: (2014-06-01)

Duration of shedding of respiratory syncytial virus in a community study of Kenyan children.
af: Okiro, E, et al.
Udgivet: (2010)

Reducing respiratory syncytial virus (RSV) hospitalization in a lower-income country by vaccinating mothers-to-be and their households
af: Samuel PC Brand, et al.
Udgivet: (2020-03-01)

Defining the vaccination window for respiratory syncytial virus (RSV) using age-seroprevalence data for children in Kilifi, Kenya
af: Nyiro, JU, et al.
Udgivet: (2017)

The transmission dynamics of groups A and B human respiratory syncytial virus (hRSV) in England and Wales and Finland: seasonality and cross-protection.
af: White, L, et al.
Udgivet: (2005)

The transmission dynamics of groups A and B human respiratory syncytial virus (hRSV) in England & Wales and Finland: seasonality and cross-protection
af: White, L, et al.
Udgivet: (2005)

Duration of shedding of respiratory syncytial virus in a community study of Kenyan children
af: Ngama Mwanajuma, et al.
Udgivet: (2010-01-01)

Evaluating the performance of tools used to call minority variants from whole genome short-read data [version 2; referees: 2 approved]
af: Khadija Said Mohammed, et al.
Udgivet: (2018-09-01)

Infection patterns of endemic human coronaviruses in rural households in coastal Kenya [version 1; peer review: 1 approved, 2 approved with reservations]
af: Ivy K. Kombe, et al.
Udgivet: (2021-02-01)

Modeling household dynamics on Respiratory Syncytial Virus (RSV)
af: Mahikul, W, et al.
Udgivet: (2019)

Vaccine Induced Herd Immunity for Control of Respiratory Syncytial Virus Disease in a Low-Income Country Setting.
af: Timothy M Kinyanjui, et al.
Udgivet: (2015-01-01)

Modeling household dynamics on Respiratory Syncytial Virus (RSV).
af: Wiriya Mahikul, et al.
Udgivet: (2019-01-01)

Spread and Evolution of Respiratory Syncytial Virus A Genotype ON1, Coastal Kenya, 2010–2015
af: James R. Otieno, et al.
Udgivet: (2017-02-01)

EVOLUTION AND TRANSMISSION OF HUMAN RESPIRATORY SYNCYTIAL VIRUS GROUP A (HRSVA) ACROSS KENYA FROM 2007 - 2010
af: J. Wangui, et al.
Udgivet: (2022-03-01)

Epidemiological and evolutionary dynamics of influenza B virus in coastal Kenya as revealed by genomic analysis of strains sampled over a single season
af: Nyasimi, FM, et al.
Udgivet: (2020)

Spatio-temporal distribution of rhinovirus types in Kenya: a retrospective analysis, 2014
af: Morobe, JM, et al.
Udgivet: (2024)

The cost of care for children hospitalized with respiratory syncytial virus (RSV) associated lower respiratory infection in Kenya
af: Joyce U. Nyiro, et al.
Udgivet: (2024-09-01)

Understanding the transmission dynamics of respiratory syncytial virus using multiple time series and nested models.
af: White, L, et al.
Udgivet: (2007)

Efficiency of transplacental transfer of respiratory syncytial virus (RSV) specific antibodies among pregnant women in Kenya
af: Nyiro, JU, et al.
Udgivet: (2022)

Implications of gestational age at antenatal care attendance on the successful implementation of a maternal respiratory syncytial virus (RSV) vaccine program in coastal Kenya
af: Nyiro, JU, et al.
Udgivet: (2020)

Drivers of respiratory syncytial virus seasonal epidemics in children under 5 years in Kilifi, coastal Kenya
af: James Wambua, et al.
Udgivet: (2022-01-01)

Drivers of respiratory syncytial virus seasonal epidemics in children under 5 years in Kilifi, coastal Kenya.
af: James Wambua, et al.
Udgivet: (2022-01-01)

Seasonality of respiratory syncytial virus infection.
af: Waris, M, et al.
Udgivet: (2006)

RESPIRATORY SYNCYTIAL VIRUS INFECTION IN INFANTS
af: K. V. YEVDOKIMOV, et al.
Udgivet: (2017-05-01)

Agreement between ELISA and plaque reduction neutralisation assay in Detection of respiratory syncytial virus specific antibodies in a birth Cohort from Kilifi, coastal Kenya
af: Nyiro, J, et al.
Udgivet: (2019)

Absence of association between cord specific antibody levels and severe respiratory syncytial virus (RSV) disease in early infants: A case control study from coastal Kenya
af: Nyiro, J, et al.
Udgivet: (2016)

Impact of viral upper respiratory tract infection on the concentration of nasopharyngeal pneumococcal carriage among Kenyan children
af: Morpeth, SC, et al.
Udgivet: (2018)