Linkage disequilibrium and age of HLA region SNPs in relation to classic HLA gene alleles within Europe.

Linkage disequilibrium and age of HLA region SNPs in relation to classic HLA gene alleles within Europe.

The HLA region on chromosome 6 is gene-rich and under selective pressure because of the high proportion of immunity-related genes. Linkage disequilibrium (LD) patterns and allele frequencies in this region are highly differentiated across broad geographical populations, making it a region of interes...

Ausführliche Beschreibung

Bibliographische Detailangaben
Hauptverfasser:	Evseeva, I, Nicodemus, K, Bonilla, C, Tonks, S, Bodmer, W
Format:	Journal article
Sprache:	English
Veröffentlicht:	2010

Ähnliche Einträge

Analysis of linkage disequilibrium within the HLA region in 10 European populations
von: Evseeva, I, et al.
Veröffentlicht: (2008)

Has HLA diversity been influenced by seafaring in Northern Europe?
von: Evseeva, I, et al.
Veröffentlicht: (2006)

MICA diversity and linkage disequilibrium with HLA-B alleles in renal-transplant candidates in southern Brazil.
von: Roger Haruki Yamakawa, et al.
Veröffentlicht: (2017-01-01)

MHC Class I Chain-Related Gene A Polymorphisms and Linkage Disequilibrium with HLA-B and HLA-C Alleles in Ocular Toxoplasmosis.
von: Christiane Maria Ayo, et al.
Veröffentlicht: (2015-01-01)

A SNP approach to HLA typing analysis
von: Evseeva, I, et al.
Veröffentlicht: (2005)

Genetic variability and linkage disequilibrium within the HLA-DP region: analysis of 15 different populations.
von: Begovich, AB, et al.
Veröffentlicht: (2001)

HLA-A, -B, -Cw,-DQA1,-DQB1 and -DRB1 allele frequencies in a Nentsy population from Russia
von: Evseeva, I, et al.
Veröffentlicht: (2004)

HLA-A*7401-mediated control of HIV viremia is independent of its linkage disequilibrium with HLA-B*5703.
von: Matthews, P, et al.
Veröffentlicht: (2011)

Association of HLA-A and Non-Classical HLA Class I Alleles.
von: Federico Carlini, et al.
Veröffentlicht: (2016-01-01)

HLA-A, -B, -Cw, -DQA1 and -DRB1 allele frequencies in a population from Orkney, Scotland
von: Tonks, S, et al.
Veröffentlicht: (2004)

Prediction of HLA class II alleles using SNPs in an African population.
von: Fasil Tekola Ayele, et al.
Veröffentlicht: (2012-01-01)

Allele frequency matching between SNPs reveals an excess of linkage disequilibrium in genic regions of the human genome.
von: Michael A Eberle, et al.
Veröffentlicht: (2006-09-01)

HLA*IMP - an integrated framework for imputing classical HLA alleles from SNP genotypes
von: Dilthey, A, et al.
Veröffentlicht: (2011)

HLA*IMP--an integrated framework for imputing classical HLA alleles from SNP genotypes.
von: Dilthey, A, et al.
Veröffentlicht: (2011)

Genetic polymorphism of the human tumor necrosis factor region in insulin-dependent diabetes mellitus. Linkage disequilibrium of TNFab microsatellite alleles with HLA haplotypes.
von: Monos, D, et al.
Veröffentlicht: (1995)

Structural variants in linkage disequilibrium with GWAS-significant SNPs
von: Hao Liang, et al.
Veröffentlicht: (2024-06-01)

Performance of random forest when SNPs are in linkage disequilibrium
von: Cupples L Adrienne, et al.
Veröffentlicht: (2009-03-01)

Correction: Prediction of HLA Class II Alleles Using SNPs in an African Population
Veröffentlicht: (2012-01-01)

Correction: Prediction of HLA Class II Alleles Using SNPs in an African Population.
von: Fasil Tekola Ayele, et al.
Veröffentlicht: (2012-01-01)

HLA-A locus alleles identified by sequence specific PCR.
von: Krausa, P, et al.
Veröffentlicht: (1993)

World distribution of HLA alleles and implications for disease - Discussion
von: Kidd, K, et al.
Veröffentlicht: (1996)

HLA Class I and II profiles in São Miguel Island (Azores): genetic diversity and linkage disequilibrium
von: Cabral Rita, et al.
Veröffentlicht: (2010-05-01)

Empirical evaluations of analytical issues arising from predicting HLA alleles using multiple SNPs
von: Hansen John A, et al.
Veröffentlicht: (2011-04-01)

Linkage disequilibrium at PPARG and other genes assessed with dense sets of SNPs..
von: Hirschhorn, J, et al.
Veröffentlicht: (2001)

HLA-A, -B, -Cw, -DQA1,-DQB1 and -DRB1 allele frequencies in a Saami population from Russia
von: Evseeva, I, et al.
Veröffentlicht: (2004)

HLA-A, -B, -Cw,-DQA1,-DQB1 and -DRB1 allele frequencies in a Pomor population from Russia
von: Evseeva, I, et al.
Veröffentlicht: (2004)

Classical and Non-Classical HLA Alleles as Supplementary Markers in Indirect Kinship Parentage Testing
von: Diamanto Kouniaki, et al.
Veröffentlicht: (2022-08-01)

Association of HLA alleles with autism
von: Sayad A, et al.
Veröffentlicht: (2018-11-01)

A linkage disequilibrium-based approach to position unmapped SNPs in crop species
von: Seema Yadav, et al.
Veröffentlicht: (2021-10-01)

HLA AND DISEASE
von: Bodmer, W
Veröffentlicht: (1979)

A statistical method for predicting classical HLA alleles from SNP data.
von: Leslie, S, et al.
Veröffentlicht: (2008)

LD-Spline: Mapping SNPs on genotyping platforms to genomic regions using patterns of linkage disequilibrium
von: Bush William S, et al.
Veröffentlicht: (2009-12-01)

High Resolution Haplotype Analyses of Classical HLA Genes in Families With Multiple Sclerosis Highlights the Role of HLA-DP Alleles in Disease Susceptibility
von: Kazutoyo Osoegawa, et al.
Veröffentlicht: (2021-05-01)

A mutated HLA-A*0101 allele in the colorectal cell line HCA-7.
von: Bicknell, D, et al.
Veröffentlicht: (2005)

High resolution allele frequency analysis of HLA-A, HLA-B, HLA-DRB1, HLA-C, HLA-DQB1 and HLA-DPB1 in Guangdong Cord Blood Bank
von: RUI Derong, et al.
Veröffentlicht: (2024-11-01)

Characterization of the linkage disequilibrium structure and identification of tagging-SNPs in five DNA repair genes
von: Camp Nicola J, et al.
Veröffentlicht: (2005-08-01)

HLA Diversity in Saudi Population: High Frequency of Homozygous HLA Alleles and Haplotypes
von: Aziz Alami Chentoufi, et al.
Veröffentlicht: (2022-06-01)

Handling linkage disequilibrium in qualitative trait linkage analysis using dense SNPs: a two-step strategy
von: Dupuis Josée, et al.
Veröffentlicht: (2009-08-01)

Comparison of HLA allelic imputation programs.
von: Jason H Karnes, et al.
Veröffentlicht: (2017-01-01)

Evolution and function of the HLA system.
von: Bodmer, W, et al.
Veröffentlicht: (1978)