ReadItAndKeep: rapid decontamination of SARS-CoV-2 sequencing reads

ReadItAndKeep: rapid decontamination of SARS-CoV-2 sequencing reads

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Viral sequence data from clinical samples frequently contain contaminating human reads, which must be removed prior to sharing for legal and ethical reasons. To enable host read removal for SARS-CoV-2 sequencing data on low-specification laptops, we developed ReadItAndKeep, a fast lightweight tool f...

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Bibliographic Details
Main Authors:	Hunt, M, Swann, J, Constantinides, B, Fowler, PW, Iqbal, Z
Format:	Journal article
Language:	English
Published:	Oxford University Press 2022

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