ReadItAndKeep: rapid decontamination of SARS-CoV-2 sequencing reads

Viral sequence data from clinical samples frequently contain contaminating human reads, which must be removed prior to sharing for legal and ethical reasons. To enable host read removal for SARS-CoV-2 sequencing data on low-specification laptops, we developed ReadItAndKeep, a fast lightweight tool f...

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Hlavní autoři: Hunt, M, Swann, J, Constantinides, B, Fowler, PW, Iqbal, Z
Médium: Journal article
Jazyk:English
Vydáno: Oxford University Press 2022