2'-Alkynylnucleotides: A Sequence- and Spin Label-Flexible Strategy for EPR Spectroscopy in DNA

Electron paramagnetic resonance (EPR) spectroscopy is a powerful method to elucidate molecular structure through the measurement of distances between conformationally well-defined spin labels. Here we report a sequence-flexible approach to the synthesis of double spin-labeled DNA duplexes, where 2′-...

Full description

Bibliographic Details
Main Authors: Anderson, E, El-Sagheer, A, Porter, R, Brown, T, Haugland, M, Peña, J, Lovett, J
Format: Journal article
Published: American Chemical Society 2016
_version_ 1797081867440095232
author Anderson, E
El-Sagheer, A
Porter, R
Brown, T
Haugland, M
Peña, J
Lovett, J
author_facet Anderson, E
El-Sagheer, A
Porter, R
Brown, T
Haugland, M
Peña, J
Lovett, J
author_sort Anderson, E
collection OXFORD
description Electron paramagnetic resonance (EPR) spectroscopy is a powerful method to elucidate molecular structure through the measurement of distances between conformationally well-defined spin labels. Here we report a sequence-flexible approach to the synthesis of double spin-labeled DNA duplexes, where 2′-alkynylnucleosides are incorporated at terminal and internal positions on complementary strands. Post-DNA synthesis copper-catalyzed azide–alkyne cycloaddition (CuAAC) reactions with a variety of spin labels enable the use of double electron–electron resonance experiments to measure a number of distances on the duplex, affording a high level of detailed structural information.
first_indexed 2024-03-07T01:20:07Z
format Journal article
id oxford-uuid:90051d24-0105-48b3-a77f-b6e39406366a
institution University of Oxford
last_indexed 2024-03-07T01:20:07Z
publishDate 2016
publisher American Chemical Society
record_format dspace
spelling oxford-uuid:90051d24-0105-48b3-a77f-b6e39406366a2022-03-26T23:08:45Z2'-Alkynylnucleotides: A Sequence- and Spin Label-Flexible Strategy for EPR Spectroscopy in DNAJournal articlehttp://purl.org/coar/resource_type/c_dcae04bcuuid:90051d24-0105-48b3-a77f-b6e39406366aSymplectic Elements at OxfordAmerican Chemical Society2016Anderson, EEl-Sagheer, APorter, RBrown, THaugland, MPeña, JLovett, JElectron paramagnetic resonance (EPR) spectroscopy is a powerful method to elucidate molecular structure through the measurement of distances between conformationally well-defined spin labels. Here we report a sequence-flexible approach to the synthesis of double spin-labeled DNA duplexes, where 2′-alkynylnucleosides are incorporated at terminal and internal positions on complementary strands. Post-DNA synthesis copper-catalyzed azide–alkyne cycloaddition (CuAAC) reactions with a variety of spin labels enable the use of double electron–electron resonance experiments to measure a number of distances on the duplex, affording a high level of detailed structural information.
spellingShingle Anderson, E
El-Sagheer, A
Porter, R
Brown, T
Haugland, M
Peña, J
Lovett, J
2'-Alkynylnucleotides: A Sequence- and Spin Label-Flexible Strategy for EPR Spectroscopy in DNA
title 2'-Alkynylnucleotides: A Sequence- and Spin Label-Flexible Strategy for EPR Spectroscopy in DNA
title_full 2'-Alkynylnucleotides: A Sequence- and Spin Label-Flexible Strategy for EPR Spectroscopy in DNA
title_fullStr 2'-Alkynylnucleotides: A Sequence- and Spin Label-Flexible Strategy for EPR Spectroscopy in DNA
title_full_unstemmed 2'-Alkynylnucleotides: A Sequence- and Spin Label-Flexible Strategy for EPR Spectroscopy in DNA
title_short 2'-Alkynylnucleotides: A Sequence- and Spin Label-Flexible Strategy for EPR Spectroscopy in DNA
title_sort 2 alkynylnucleotides a sequence and spin label flexible strategy for epr spectroscopy in dna
work_keys_str_mv AT andersone 2alkynylnucleotidesasequenceandspinlabelflexiblestrategyforeprspectroscopyindna
AT elsagheera 2alkynylnucleotidesasequenceandspinlabelflexiblestrategyforeprspectroscopyindna
AT porterr 2alkynylnucleotidesasequenceandspinlabelflexiblestrategyforeprspectroscopyindna
AT brownt 2alkynylnucleotidesasequenceandspinlabelflexiblestrategyforeprspectroscopyindna
AT hauglandm 2alkynylnucleotidesasequenceandspinlabelflexiblestrategyforeprspectroscopyindna
AT penaj 2alkynylnucleotidesasequenceandspinlabelflexiblestrategyforeprspectroscopyindna
AT lovettj 2alkynylnucleotidesasequenceandspinlabelflexiblestrategyforeprspectroscopyindna