Modeling population structure under hierarchical Dirichlet processes

We propose a Bayesian nonparametric model to infer population admixture, extending the hierarchical Dirichlet process to allow for correlation between loci due to linkage disequilibrium. Given multilocus genotype data from a sample of individuals, the proposed model allows inferring and classifying...

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Bibliographic Details
Main Authors: Elliott, L, De Iorio, M, Favaro, S, Adhikari, K, Teh, Y
Format: Journal article
Published: International Society for Bayesian Analysis 2018