Estimating transmission from genetic and epidemiological data: a metric to compare transmission trees

Reconstructing who infected whom is a central challenge in analysing epidemiological data. Recently, advances in sequencing technology have led to increasing interest in Bayesian approaches to inferring who infected whom using genetic data from pathogens. The logic behind such approaches is that iso...

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Bibliographic Details
Main Authors: Kendall, M, Ayabina, D, Colijn, C, Xu, Y, Stimson, J
Format: Journal article
Published: Institute of Mathematical Statistics 2018