Exploring conformational transitions and free-energy profiles of proton-coupled oligopeptide transporters

Exploring conformational transitions and free-energy profiles of proton-coupled oligopeptide transporters

Proteins involved in peptide uptake and transport belong to the proton-coupled oligopeptide transporter (POT) family. Crystal structures of POT family members reveal a common fold consisting of two domains of six transmembrane α helices that come together to form a "V" shaped transporter w...

Deskribapen osoa

Xehetasun bibliografikoak
Egile Nagusiak:	Batista, MRB, Watts, A, Costa-Filho, AJ
Formatua:	Journal article
Hizkuntza:	English
Argitaratua:	American Chemical Society 2019

Antzeko izenburuak

Energetics of substrate transport in proton-dependent oligopeptide transporters
nork: Balaji Selvam, et al.
Argitaratua: (2024-12-01)

Molecular Dynamics Simulations Reveal the Proton:Peptide Coupling Mechanism in the Bacterial Proton-Coupled Oligopeptide Transporter YbgH
nork: Nanda G. Aduri, et al.
Argitaratua: (2019-01-01)

Molecular Insights to the Structure-Interaction Relationships of Human Proton-Coupled Oligopeptide Transporters (PepTs)
nork: Yining Luo, et al.
Argitaratua: (2023-10-01)

Structural insights into substrate recognition in proton-dependent oligopeptide transporters
nork: Quistgaard, Esben M., et al.
Argitaratua: (2013)

Biochemical and biophysical studies of the prokaryotic proton dependent oligopeptide transporters
nork: Solcan, N
Argitaratua: (2013)

Accurate Prediction of Ligand Affinities for a Proton-Dependent Oligopeptide Transporter
nork: Newstead, S, et al.
Argitaratua: (2016)

Conformational flexibility of GRASPs and their constituent PDZ subdomains reveals structural basis of their promiscuous interactome
nork: Mendes, LFS, et al.
Argitaratua: (2020)

Improving oral drug delivery: computational studies of proton dependent oligopeptide transporters
nork: Samsudin, M
Argitaratua: (2015)

Towards a structural understanding of drug and peptide transport within the proton-dependent oligopeptide transporter (POT) family.
nork: Newstead, S
Argitaratua: (2011)

Towards a Structural Understanding of Alternating Access within the Proton Dependent Oligopeptide Transporter (POT) Family
nork: Newstead, S
Argitaratua: (2012)

Characterization of the PT Clade of Oligopeptide Transporters in Rice
nork: Marta W. Vasconcelos, et al.
Argitaratua: (2008-11-01)

Randomizing of Oligopeptide Conformations by Nearest Neighbor Interactions between Amino Acid Residues
nork: Reinhard Schweitzer-Stenner, et al.
Argitaratua: (2022-05-01)

Structures in multiple conformations reveal distinct transition metal and proton pathways in an Nramp transporter
nork: Aaron T Bozzi, et al.
Argitaratua: (2019-02-01)

Alternating access mechanism in the POT family of oligopeptide transporters.
nork: Solcan, N, et al.
Argitaratua: (2012)

Alternating access mechanism in the POT family of oligopeptide transporters
nork: Solcan, N, et al.
Argitaratua: (2012)

Analyses of the oligopeptide transporter gene family in poplar and grape
nork: Yang Yongping, et al.
Argitaratua: (2011-09-01)

Functional characterization of oligopeptide transporter 1 of dairy cows
nork: Qingbiao Xu, et al.
Argitaratua: (2018-01-01)

Theoretical and NMR Conformational Studies of β-Proline Oligopeptides With Alternating Chirality of Pyrrolidine Units
nork: Alexey B. Mantsyzov, et al.
Argitaratua: (2018-03-01)

Long-Distance Protonation-Conformation Coupling in Phytochrome Species
nork: Maryam Sadeghi, et al.
Argitaratua: (2022-12-01)

Electrophysiological analysis of the epithelial H+/oligopeptide transporter, PepT1
nork: Beattie, L, et al.
Argitaratua: (2001)

Cyclic di-AMP traps proton-coupled K+ transporters of the KUP family in an inward-occluded conformation
nork: Michael F. Fuss, et al.
Argitaratua: (2023-06-01)

Process for making oligopeptides
nork: Jiang, S
Argitaratua: (2008)

Concentration-Driven Assembly and Sol–Gel Transition of π‑Conjugated Oligopeptides
nork: Yuecheng Zhou, et al.
Argitaratua: (2017-08-01)

Molecular and structural basis of oligopeptide recognition by the Ami transporter system in pneumococci.
nork: Martín Alcorlo, et al.
Argitaratua: (2024-06-01)

Transport Deficiency Is the Molecular Basis of Candida albicans Resistance to Antifungal Oligopeptides
nork: Marta Schielmann, et al.
Argitaratua: (2017-11-01)

Diversity of Oligopeptide Transport in Yeast and Its Impact on Adaptation to Winemaking Conditions
nork: Carmen Becerra-Rodríguez, et al.
Argitaratua: (2020-06-01)

Crystal structure of a prokaryotic homologue of the mammalian oligopeptide-proton symporters, PepT1 and PepT2.
nork: Newstead, S, et al.
Argitaratua: (2011)

Crystal structure of a prokaryotic homologue of the mammalian oligopeptide-proton symporters, PepT1 and PepT2
nork: Newstead, S, et al.
Argitaratua: (2011)

Exploring conformational equilibria of a heterodimeric ABC transporter
nork: M Hadi Timachi, et al.
Argitaratua: (2017-01-01)

The conformation of an inhibitor bound to the gastric proton pump.
nork: Middleton, D, et al.
Argitaratua: (1997)

Impact of nanodisc lipid composition on cell-free expression of proton-coupled folate transporter
nork: Hoa Quynh Do, et al.
Argitaratua: (2021-01-01)

Two mechanisms of membrane digestion: enzymatic-transport ensemble exists for oligopeptides as well
nork: S. T. Metelsky, et al.
Argitaratua: (2011-05-01)

An oligopeptide transporter of Mycobacterium tuberculosis regulates cytokine release and apoptosis of infected macrophages.
nork: Arunava Dasgupta, et al.
Argitaratua: (2010-01-01)

Coupled free fermion conformal field theories
nork: Peter Bouwknegt, et al.
Argitaratua: (2024-08-01)

Identification of an oligopeptide binding to hepatocellular carcinoma.
nork: Shimizu, A, et al.
Argitaratua: (2006)

SYNTHESIS OF OLIGOPEPTIDES OF DEFINED FRAGMENT COMPOSITION
nork: Tamara Paypanova, et al.
Argitaratua: (2011-05-01)

The mechanism of mammalian proton-coupled peptide transporters
nork: Simon M Lichtinger, et al.
Argitaratua: (2024-07-01)

Proton-control of transitions in an amino-acid transporter
nork: Wu, Z, et al.
Argitaratua: (2019)

Proton-control of transitions in an amino-acid transporter
nork: Wu, Z, et al.
Argitaratua: (2019)

Exploring the conformal transition from above and below
nork: Alex Pomarol, et al.
Argitaratua: (2024-08-01)