New powerful statistics for alignment-free sequence comparison under a pattern transfer model.

Alignment-free sequence comparison is widely used for comparing gene regulatory regions and for identifying horizontally transferred genes. Recent studies on the power of a widely used alignment-free comparison statistic D2 and its variants D*2 and D(s)2 showed that their power approximates a limit...

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Bibliographic Details
Main Authors: Liu, X, Wan, L, Li, J, Reinert, G, Waterman, MS, Sun, F
Format: Journal article
Language:English
Published: 2011