Assessment of phylogenetic sensitivity for reconstructing HIV-1 epidemiological relationships.

Assessment of phylogenetic sensitivity for reconstructing HIV-1 epidemiological relationships.

Diğer sürümleri göster (2)

Phylogenetic analysis has been extensively used as a tool for the reconstruction of epidemiological relations for research or for forensic purposes. It was our objective to assess the sensitivity of different phylogenetic methods and various phylogenetic programs to reconstruct epidemiological links...

Detaylı Bibliyografya
Asıl Yazarlar:	Beloukas, A, Magiorkinis, E, Magiorkinis, G, Zavitsanou, A, Karamitros, T, Hatzakis, A, Paraskevis, D
Materyal Türü:	Journal article
Dil:	English
Baskı/Yayın Bilgisi:	2012

Benzer Materyaller

Assessment of phylogenetic sensitivity for reconstructing HIV-1 epidemiological relationships
Yazar:: Beloukas, A, ve diğerleri
Baskı/Yayın Bilgisi: (2012)

Assessment of phylogenetic sensitivity for reconstructing HIV-1 epidemiological relationships
Yazar:: Beloukas, A, ve diğerleri
Baskı/Yayın Bilgisi: (2012)

The phylogenetic information profile of HIV-1 and the degradation effect of recombination.
Yazar:: Magiorkinis, G, ve diğerleri
Baskı/Yayın Bilgisi: (2008)

Phylogenetic reconstruction of a known HIV-1 CRF04_cpx transmission network using maximum likelihood and Bayesian methods.
Yazar:: Paraskevis, D, ve diğerleri
Baskı/Yayın Bilgisi: (2004)

Analysing the evolutionary history of HCV: puzzle of ancient phylogenetic discordance.
Yazar:: Magiorkinis, G, ve diğerleri
Baskı/Yayın Bilgisi: (2007)

Re-analysis of 34 full-length HIV-1 intersubtype recombinant sequences
Yazar:: Magiorkinis, G, ve diğerleri
Baskı/Yayın Bilgisi: (2005)

Re-analysis of 34 full-length HIV-1 intersubtype recombinant sequences.
Yazar:: Magiorkinis, G, ve diğerleri
Baskı/Yayın Bilgisi: (2005)

Comments on "the distribution of HIV-1 recombination breakpoints" by Jun Fan, Matteo Negroni, David L. Robertson.
Yazar:: Magiorkinis, G, ve diğerleri
Baskı/Yayın Bilgisi: (2008)

Reanalysis of the HIV-1 circulating recombinant form A/E (CRF01_AE): evidence of A/E/G recombination.
Yazar:: Magiorkinis, G, ve diğerleri
Baskı/Yayın Bilgisi: (2002)

Phylogenetic analysis of the full-length SARS-CoV sequences: evidence for phylogenetic discordance in three genomic regions.
Yazar:: Magiorkinis, G, ve diğerleri
Baskı/Yayın Bilgisi: (2004)

Re-analysis of a human hepatitis B virus (HBV) isolate from an East African wild born Pan troglodytes schweinfurthii: evidence for interspecies recombination between HBV infecting chimpanzee and human.
Yazar:: Magiorkinis, E, ve diğerleri
Baskı/Yayın Bilgisi: (2005)

An innovative study design to assess the community effect of interventions to mitigate HIV epidemics using transmission-chain phylodynamics
Yazar:: Magiorkinis, G, ve diğerleri
Baskı/Yayın Bilgisi: (2018)

Hepatitis B virus (HBV) genotypes: From epidemiology to clinical practice
Yazar:: Magiorkinis, E, ve diğerleri
Baskı/Yayın Bilgisi: (2007)

Molecular characterization of complex, recombinant human immunodeficiency virus type 1 (HIV-1) isolate (A/G/J/K/?): Evidence to support the existence of a novel HIV-1 subtype
Yazar:: Paraskevis, D, ve diğerleri
Baskı/Yayın Bilgisi: (2001)

Molecular characterization of a complex, recombinant human immunodeficiency virus type 1 (HIV-1) isolate (A/G/J/K/?): evidence to support the existence of a novel HIV-1 subtype.
Yazar:: Paraskevis, D, ve diğerleri
Baskı/Yayın Bilgisi: (2001)

In vivo characteristics of human immunodeficiency virus type 1 intersubtype recombination: determination of hot spots and correlation with sequence similarity.
Yazar:: Magiorkinis, G, ve diğerleri
Baskı/Yayın Bilgisi: (2003)

A contaminant-free assessment of Endogenous Retroviral RNA in human plasma
Yazar:: Karamitros, T, ve diğerleri
Baskı/Yayın Bilgisi: (2016)

Impact of Interferon-α Receptor-1 Promoter Polymorphisms on the Transcriptome of the Hepatitis B Virus-Associated Hepatocellular Carcinoma
Yazar:: Timokratis Karamitros, ve diğerleri
Baskı/Yayın Bilgisi: (2018-04-01)

SlidingBayes: exploring recombination using a sliding window approach based on Bayesian phylogenetic inference.
Yazar:: Paraskevis, D, ve diğerleri
Baskı/Yayın Bilgisi: (2005)

Integrating phylodynamics and epidemiology to estimate transmission diversity in viral epidemics
Yazar:: Magiorkinis, G, ve diğerleri
Baskı/Yayın Bilgisi: (2013)

The interferon receptor-1 promoter polymorphisms affect the outcome of Caucasians with HBeAg-negative chronic HBV infection
Yazar:: Karamitros, T, ve diğerleri
Baskı/Yayın Bilgisi: (2015)

Impact of interferon-alpha receptor-1 promoter polymorphisms on the transcriptome of the hepatitis B virus-associated hepatocellular carcinoma
Yazar:: Karamitros, T, ve diğerleri
Baskı/Yayın Bilgisi: (2018)

Reducing HIV infection in people who inject drugs is impossible without targeting recently-infected subjects
Yazar:: Vasylyeva, T, ve diğerleri
Baskı/Yayın Bilgisi: (2016)

The global spread of hepatitis C virus 1a and 1b: a phylodynamic and phylogeographic analysis.
Yazar:: Magiorkinis, G, ve diğerleri
Baskı/Yayın Bilgisi: (2009)

The global spread of hepatitis C virus 1a and 1b: a phylodynamic and phylogeographic analysis
Yazar:: Magiorkinis, G, ve diğerleri
Baskı/Yayın Bilgisi: (2009)

Dating the origin and dispersal of hepatitis B virus infection in humans and primates
Yazar:: Paraskevis, D, ve diğerleri
Baskı/Yayın Bilgisi: (2013)

Dating the origin and dispersal of hepatitis B virus infection in humans and primates.
Yazar:: Paraskevis, D, ve diğerleri
Baskı/Yayın Bilgisi: (2013)

The impact of primary prevention and treatment as prevention in controlling the epidemic of hepatitis C under the new therapeutic options
Yazar:: Sypsa, V, ve diğerleri
Baskı/Yayın Bilgisi: (2012)

Quantitative detection of the M204V hepatitis B virus minor variants by amplification refractory mutation system real-time PCR combined with molecular beacon technology.
Yazar:: Ntziora, F, ve diğerleri
Baskı/Yayın Bilgisi: (2009)

Integrating phylodynamics and epidemiology to estimate transmission diversity in viral epidemics.
Yazar:: Gkikas Magiorkinis, ve diğerleri
Baskı/Yayın Bilgisi: (2013-01-01)

Mutations associated with genotypic resistance to antiretroviral therapy in treatment naive HIV-1 infected patients in Greece.
Yazar:: Magiorkinis, E, ve diğerleri
Baskı/Yayın Bilgisi: (2002)

A novel method for the multiplexed target enrichment of MinION next generation sequencing libraries using PCR-generated baits
Yazar:: Karamitros, T, ve diğerleri
Baskı/Yayın Bilgisi: (2015)

Integrating molecular epidemiology and social network analysis to study infectious diseases: towards a socio-molecular era for public health
Yazar:: Vasylyeva, T, ve diğerleri
Baskı/Yayın Bilgisi: (2016)

In vivo characteristics of human immunodeficiency virus type 1 intersubtype recombination: Determination of hot spots and correlation with sequence similarity
Yazar:: Magiorkinis, G, ve diğerleri
Baskı/Yayın Bilgisi: (2003)

Superspreading and transmission variation in HCV epidemics
Yazar:: Magiorkinis, G, ve diğerleri
Baskı/Yayın Bilgisi: (2012)

The global spread of hepatitis C virus 1a and 1b: a phylodynamic and phylogeographic analysis.
Yazar:: Gkikas Magiorkinis, ve diğerleri
Baskı/Yayın Bilgisi: (2009-12-01)

Appearance of a single amino acid insertion at position 33 in HIV type 1 protease under a lopinavir-containing regimen, associated with reduced protease inhibitor susceptibility.
Yazar:: Magiorkinis, E, ve diğerleri
Baskı/Yayın Bilgisi: (2011)

Molecular epidemiology reveals the role of war in the spread of HIV in Ukraine.
Yazar:: Vasylyeva, TI, ve diğerleri
Baskı/Yayın Bilgisi: (2018)

Reducing HIV infection in people who inject drugs is impossible without targeting recently-infected subjects.
Yazar:: Vasylyeva, TI, ve diğerleri
Baskı/Yayın Bilgisi: (2016)

In vitro hepatitis C virus replication systems and novel therapeutic agents for chronic hepatitis C
Yazar:: Ntziora, F, ve diğerleri
Baskı/Yayın Bilgisi: (2006)