HLArestrictor--a tool for patient-specific predictions of HLA restriction elements and optimal epitopes within peptides.

HLArestrictor--a tool for patient-specific predictions of HLA restriction elements and optimal epitopes within peptides.

Traditionally, T cell epitope discovery requires considerable amounts of tedious, slow, and costly experimental work. During the last decade, prediction tools have emerged as essential tools allowing researchers to select a manageable list of epitope candidates to test from a larger peptide, protein...

Szczegółowa specyfikacja

Opis bibliograficzny
Główni autorzy:	Erup Larsen, M, Kloverpris, H, Stryhn, A, Koofhethile, C, Sims, S, Ndung'u, T, Goulder, P, Buus, S, Nielsen, M
Format:	Journal article
Język:	English
Wydane:	2011

Podobne zapisy

HLA-B*4201-restricted inter- and intra-protein-specific differences in anti-HIV CD8(+) T-cell epitope efficacy
od: Kloverpris, H, i wsp.
Wydane: (2010)

HLA-specific intracellular epitope processing shapes an immunodominance pattern for HLA-B*57 that is distinct from HLA-B*58:01.
od: Kløverpris, H, i wsp.
Wydane: (2013)

HLA-B*57 Micropolymorphism shapes HLA allele-specific epitope immunogenicity, selection pressure, and HIV immune control.
od: Kloverpris, H, i wsp.
Wydane: (2012)

Identification of conserved subdominant HIV Type 1 CD8(+) T Cell epitopes restricted within common HLA Supertypes for therapeutic HIV Type 1 vaccines.
od: Karlsson, I, i wsp.
Wydane: (2012)

HLA-A*68:02-restricted Gag-specific cytotoxic T lymphocyte responses can drive selection pressure on HIV but are subdominant and ineffective.
od: Kløverpris, H, i wsp.
Wydane: (2013)

HLA-A*68: 02-restricted Gag-specific cytotoxic T lymphocyte responses can drive selection pressure on HIV but are subdominant and ineffective
od: Kløverpris, H, i wsp.
Wydane: (2013)

Major TCR repertoire perturbation by immunodominant HLA-B*44:03-restricted CMV-specific T cells
od: Attaf, M, i wsp.
Wydane: (2018)

Differential escape patterns within the dominant HLA-B*57:03-restricted HIV Gag epitope reflect distinct clade-specific functional constraints.
od: Payne, R, i wsp.
Wydane: (2014)

Identification of a novel HLA-B*3501-restricted cytotoxic T lymphocyte epitope using overlapping peptides.
od: Goulder, P, i wsp.
Wydane: (1997)

Major TCR Repertoire Perturbation by Immunodominant HLA-B*44:03-Restricted CMV-Specific T Cells
od: Meriem Attaf, i wsp.
Wydane: (2018-11-01)

Identification of a novel HLA-A24-restricted cytotoxic T-lymphocyte epitope within HIV-1 Nef.
od: Goulder, P, i wsp.
Wydane: (1997)

Human leukocyte antigen (HLA) class I restricted epitope discovery in yellow fewer and dengue viruses: importance of HLA binding strength.
od: Ole Lund, i wsp.
Wydane: (2011-01-01)

Unbiased Characterization of Peptide-HLA Class II Interactions Based on Large-Scale Peptide Microarrays; Assessment of the Impact on HLA Class II Ligand and Epitope Prediction
od: Mareike Wendorff, i wsp.
Wydane: (2020-08-01)

Correction: Human Leukocyte Antigen (HLA) Class I Restricted Epitope Discovery in Yellow Fewer and Dengue Viruses: Importance of HLA Binding Strength.
od: Ole Lund, i wsp.
Wydane: (2011-01-01)

Immunodominant HIV-1-specific HLA-B- and HLA-C-restricted CD8+ T cells do not differ in polyfunctionality.
od: Mkhwanazi, N, i wsp.
Wydane: (2010)

Identification of a novel HLA-B*2705-restricted cytotoxic T-lymphocyte epitope within a conserved region of HIV-1 Nef.
od: Goulder, P, i wsp.
Wydane: (1997)

An HLA-B35-restricted epitope modified at an anchor residue results in an antagonist peptide.
od: Dong, T, i wsp.
Wydane: (1996)

Programmed death-1 expression on HIV-1-specific CD8+ T cells is shaped by epitope specificity, T-cell receptor clonotype usage and antigen load.
od: Kløverpris, H, i wsp.
Wydane: (2014)

Programmed death-1 expression on HIV-1-specific CD8+ T cells is shaped by epitope specificity, T-cell receptor clonotype usage and antigen load
od: Kløverpris, H, i wsp.
Wydane: (2014)

Efficacious early antiviral activity of HIV Gag- and Pol-specific HLA-B 2705-restricted CD8+ T cells.
od: Payne, R, i wsp.
Wydane: (2010)

ROLE OF HLA ADAPTATION IN HIV EVOLUTION
od: Henrik Nyhus Kløverpris, i wsp.
Wydane: (2016-01-01)

Immunogenicity of HLA Class I and II Double Restricted Influenza A-Derived Peptides.
od: Sara Ram Pedersen, i wsp.
Wydane: (2016-01-01)

HLA-B57-restricted cytotoxic T-lymphocyte activity in a single infected subject toward two optimal epitopes, one of which is entirely contained within the other.
od: Goulder, P, i wsp.
Wydane: (2000)

Widespread impact of HLA restriction on immune control and escape pathways of HIV-1.
od: Carlson, J, i wsp.
Wydane: (2012)

Revisiting the Influence of HLA-type, Frequency, HLA-supertype and Homozygosity on the Immune Control of HIV
od: Leslie, A, i wsp.
Wydane: (2008)

HIV control through a single nucleotide on the HLA-I locus
od: Kløverpris H, i wsp.
Wydane: (2012-09-01)

Combined structural and immunological refinement of HIV-1 HLA-B8-restricted cytotoxic T lymphocyte epitopes.
od: Goulder, P, i wsp.
Wydane: (1997)

Identification of novel HLA-A2-restricted human immunodeficiency virus type 1-specific cytotoxic T-lymphocyte epitopes predicted by the HLA-A2 supertype peptide-binding motif.
od: Altfeld, M, i wsp.
Wydane: (2001)

HIV control through a single nucleotide on the HLA-B locus.
od: Kløverpris, H, i wsp.
Wydane: (2012)

The ADAMTS131239–1253 peptide is a dominant HLA-DR1-restricted CD4+ T-cell epitope
od: Laurent Gilardin, i wsp.
Wydane: (2017-11-01)

Differential clade-specific HLA-B*3501 association with HIV-1 disease outcome is linked to immunogenicity of a single Gag epitope.
od: Matthews, P, i wsp.
Wydane: (2012)

HLA-A*7401-mediated control of HIV viremia is independent of its linkage disequilibrium with HLA-B*5703.
od: Matthews, P, i wsp.
Wydane: (2011)

Identification of a novel HLA B*57 restricted cytotoxic T-lymphocyte epitope within HIV-1 rev.
od: Makadzange, A, i wsp.
Wydane: (2006)

HIV-1 Escape from an HLA-B*13-Restricted Gag Epitope Affects the Gag-Pol Frameshift Stem-loop and Reduces Viral Fitness
od: Prado, J, i wsp.
Wydane: (2008)

Experimental validation of the RATE tool for inferring HLA restrictions of T cell epitopes
od: Sinu Paul, i wsp.
Wydane: (2017-06-01)

Identification of an HLA-A2-restricted epitope peptide derived from hypoxia-inducible protein 2 (HIG2).
od: Sachiko Yoshimura, i wsp.
Wydane: (2014-01-01)

Differential selection pressure exerted on HIV by CTL targeting identical epitopes but restricted by distinct HLA alleles from the same HLA supertype.
od: Leslie, A, i wsp.
Wydane: (2006)

Unbiased Profiling Reveals Compartmentalization of Unconventional T-Cells Within the Intestinal Mucosa Irrespective of HIV Infection
od: Magalli Magnoumba, i wsp.
Wydane: (2020-09-01)

HLA-B63 presents HLA-B57/B58-restricted cytotoxic T-lymphocyte epitopes and is associated with low human immunodeficiency virus load.
od: Frahm, N, i wsp.
Wydane: (2005)

Comparison between two peptide epitopes presented to cytotoxic T lymphocytes by HLA-A2. Evidence for discrete locations within HLA-A2.
od: Robbins, P, i wsp.
Wydane: (1989)