Affymetrix GeneChip system: moving from research to the clinic.

Affymetrix GeneChip system: moving from research to the clinic.

Affymetrix Inc.'s GeneChip technology has become the industry standard in microarray-based research. Due to the high density of content per array that can be achieved today (an industry leading 6.5 million features) the GeneChips can be used for high-throughput mutation detection, single nucleo...

Cur síos iomlán

Sonraí bibleagrafaíochta
Príomhchruthaitheoirí:	Ragoussis, J, Elvidge, G
Formáid:	Journal article
Teanga:	English
Foilsithe / Cruthaithe:	2006

Míreanna comhchosúla

Assessing affymetrix GeneChip microarray quality
de réir: Lukk Margus, et al.
Foilsithe / Cruthaithe: (2011-05-01)

Using surveys of Affymetrix GeneChips to study antisense expression
de réir: Sanchez-Graillet Olivia, et al.
Foilsithe / Cruthaithe: (2010-06-01)

Analysis of Affymetrix GeneChip® data using amplified RNA
de réir: Leslie Cope, et al.
Foilsithe / Cruthaithe: (2006-02-01)

Comparison of target labeling methods for use with Affymetrix GeneChips
de réir: Vernon Suzanne D, et al.
Foilsithe / Cruthaithe: (2007-05-01)

Establishing a major cause of discrepancy in the calibration of Affymetrix GeneChips
de réir: Johnston Caroline E, et al.
Foilsithe / Cruthaithe: (2007-06-01)

Evaluation of the similarity of gene expression data estimated with SAGE and Affymetrix GeneChips
de réir: Asgharnegad Lida, et al.
Foilsithe / Cruthaithe: (2005-06-01)

Interpretation of multiple probe sets mapping to the same gene in Affymetrix GeneChips
de réir: Harrison Andrew P, et al.
Foilsithe / Cruthaithe: (2007-01-01)

SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
de réir: Takada Toyoyuki, et al.
Foilsithe / Cruthaithe: (2009-05-01)

Uncovering the expression patterns of chimeric transcripts using surveys of Affymetrix GeneChips
de réir: Rowsell Joanna, et al.
Foilsithe / Cruthaithe: (2010-12-01)

Widespread existence of uncorrelated probe intensities from within the same probeset on Affymetrix GeneChips
de réir: Sanchez-Graillet Olivia, et al.
Foilsithe / Cruthaithe: (2008-06-01)

Coverage and characteristics of the Affymetrix GeneChip Human Mapping 100K SNP set.
Foilsithe / Cruthaithe: (2006-05-01)

A statistical framework for consolidating "sibling" probe sets for Affymetrix GeneChip data
de réir: Zhu Dongxiao, et al.
Foilsithe / Cruthaithe: (2008-04-01)

Assessment of the relationship between pre-chip and post-chip quality measures for Affymetrix GeneChip expression data
de réir: Augood Sarah J, et al.
Foilsithe / Cruthaithe: (2006-04-01)

A Comparative Study of the Impact of G-Stack Probes on Various Affymetrix GeneChips of Mammalia
de réir: Farhat Naureen Memon, et al.
Foilsithe / Cruthaithe: (2010-01-01)

Experimental comparison and evaluation of the Affymetrix exon and U133Plus2 GeneChip arrays.
de réir: Diana Abdueva, et al.
Foilsithe / Cruthaithe: (2007-09-01)

Quality assessment of buccal versus blood genomic DNA using the Affymetrix 500 K GeneChip
de réir: Martin Lisa J, et al.
Foilsithe / Cruthaithe: (2007-11-01)

SNiPer: Improved SNP genotype calling for Affymetrix 10K GeneChip microarray data
de réir: Pearson John V, et al.
Foilsithe / Cruthaithe: (2005-10-01)

Framework for reanalysis of publicly available Affymetrix® GeneChip® data sets based on functional regions of interest
de réir: Ernur Saka, et al.
Foilsithe / Cruthaithe: (2017-12-01)

Preferred analysis methods for Affymetrix GeneChips. II. An expanded, balanced, wholly-defined spike-in dataset
de réir: Zhu Qianqian, et al.
Foilsithe / Cruthaithe: (2010-05-01)

AffyMAPSDetector: a software tool to characterize Affymetrix GeneChip™ expression arrays with respect to SNPs
de réir: Weller Jennifer W, et al.
Foilsithe / Cruthaithe: (2007-07-01)

Large-scale analysis of antisense transcription in wheat using the Affymetrix GeneChip Wheat Genome Array
de réir: Settles Matthew L, et al.
Foilsithe / Cruthaithe: (2009-05-01)

On the necessity of different statistical treatment for Illumina BeadChip and Affymetrix GeneChip data and its significance for biological interpretation
de réir: Eisenhaber Frank, et al.
Foilsithe / Cruthaithe: (2008-06-01)

Use of the Affymetrix Human GeneChip array and genomic DNA hybridisation probe selection to study ovine transcriptomes
de réir: N.S. Graham, et al.
Foilsithe / Cruthaithe: (2011-01-01)

Utilization of AFFX spike-in control probes to monitor sample identity throughout Affymetrix GeneChip Array processing
de réir: Michael Walter, et al.
Foilsithe / Cruthaithe: (2010-05-01)

Probe set filtering increases correlation between Affymetrix GeneChip and qRT-PCR expression measurements
de réir: Dabrowski Michal, et al.
Foilsithe / Cruthaithe: (2010-02-01)

Comparing gene discovery from Affymetrix GeneChip microarrays and Clontech PCR-select cDNA subtraction: a case study
de réir: Wright Paul S, et al.
Foilsithe / Cruthaithe: (2004-04-01)

Dissecting an alternative splicing analysis workflow for GeneChip<sup>® </sup>Exon 1.0 ST Affymetrix arrays
de réir: Calogero Raffaele A, et al.
Foilsithe / Cruthaithe: (2008-11-01)

Gene expression profiling of chromophobe renal cell carcinomas and renal oncocytomas by Affymetrix GeneChip using pooled and individual tumours
de réir: Maria V. Yusenko, Dmitry Zubakov, Gyula Kovacs
Foilsithe / Cruthaithe: (2009-01-01)

Evaluation of gene expression data generated from expired Affymetrix GeneChip<sup>®</sup> microarrays using MAQC reference RNA samples
de réir: Tong Weida, et al.
Foilsithe / Cruthaithe: (2010-10-01)

BEAT: Bioinformatics Exon Array Tool to store, analyze and visualize Affymetrix GeneChip Human Exon Array data from disease experiments
de réir: Consiglio Arianna, et al.
Foilsithe / Cruthaithe: (2012-03-01)

A summarization approach for Affymetrix GeneChip data using a reference training set from a large, biologically diverse database
de réir: Tripputi Mark, et al.
Foilsithe / Cruthaithe: (2006-10-01)

GCOD - GeneChip Oncology Database
de réir: Gusenleitner Daniel, et al.
Foilsithe / Cruthaithe: (2011-02-01)

Washing scaling of GeneChip microarray expression
de réir: Krohn Knut, et al.
Foilsithe / Cruthaithe: (2010-05-01)

The chemiluminescence based Ziplex<sup>® </sup>automated workstation focus array reproduces ovarian cancer Affymetrix GeneChip<sup>® </sup>expression profiles
de réir: Provencher Diane, et al.
Foilsithe / Cruthaithe: (2009-07-01)

Genome-wide loss of heterozygosity and copy number alteration in esophageal squamous cell carcinoma using the Affymetrix GeneChip Mapping 10 K array
de réir: Goldstein Alisa M, et al.
Foilsithe / Cruthaithe: (2006-11-01)

MC3T3 osteoblast-like cells cultured at alkaline pH: Microarray data (Affymetrix GeneChip Mouse 2.0 ST)
de réir: Anne-Marie Galow, et al.
Foilsithe / Cruthaithe: (2017-08-01)

Estimating RNA-quality using GeneChip microarrays
de réir: Fasold Mario, et al.
Foilsithe / Cruthaithe: (2012-05-01)

"Hook"-calibration of GeneChip-microarrays: Theory and algorithm
de réir: Preibisch Stephan, et al.
Foilsithe / Cruthaithe: (2008-08-01)

"Hook"-calibration of GeneChip-microarrays: Chip characteristics and expression measures
de réir: Krohn Knut, et al.
Foilsithe / Cruthaithe: (2008-08-01)

Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samples
de réir: Kaput Jim, et al.
Foilsithe / Cruthaithe: (2008-08-01)