The effect of RNA substitution models on viroid and RNA virus phylogenies.

Many viroids and RNA viruses have genomes that exhibit secondary structure, with paired nucleotides forming stems and loops. Such structures violate a key assumption of most methods of phylogenetic reconstruction, that sequence change is independent among sites. However, phylogenetic analyses of the...

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Bibliographic Details
Main Authors: Galindo, JÁ, Candelas, F, Pybus, OG
Format: Journal article
Language:English
Published: Oxford University Press 2018