Reducing the number of artifactual repeats in de novo assembly of RNA-Seq data by optimizing the assembly pipeline
One of the problems of de novo assembly is the occurrence of artifactual direct or inverted repeats that are mainly formed by misassembly of short sequencing reads and cannot be differentiated from real sequence repeats. In this study, we compared the frequency of artifactual repeats generated by fo...
| Main Authors: | , , , , , , , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Elsevier
2017
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| Online Access: | http://psasir.upm.edu.my/id/eprint/62927/1/Reducing%20the%20number%20of%20artifactual%20repeats%20in%20de%20novo%20.pdf |