Recombination-mediated escape from primary CD8+T cells in acute HIV-1 infection

Background: A major immune evasion mechanism of HIV-1 is the accumulation of non-synonymous mutations in and around T cell epitopes, resulting in loss of T cell recognition and virus escape.Results: Here we analyze primary CD8+ T cell responses and virus escape in a HLA B*81 expressing subject who w...

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Bibliographic Details
Main Authors: Ritchie, A, Cai, F, Smith, N, Chen, S, Song, H, Brackenridge, S, Karim, S, Korber, B, Mcmichael, A, Gao, F, Goonetilleke, N
Format: Journal article
Language:English
Published: BioMed Central 2014
Description
Summary:Background: A major immune evasion mechanism of HIV-1 is the accumulation of non-synonymous mutations in and around T cell epitopes, resulting in loss of T cell recognition and virus escape.Results: Here we analyze primary CD8+ T cell responses and virus escape in a HLA B*81 expressing subject who was infected with two T/F viruses from a single donor. In addition to classic escape through non-synonymous mutation/s, we also observed rapid selection of multiple recombinant viruses that conferred escape from T cells specific for two epitopes in Nef.Conclusions: Our study shows that recombination between multiple T/F viruses provide greater options for acute escape from CD8+ T cell responses than seen in cases of single T/F virus infection. This process may contribute to the rapid disease progression in patients infected by multiple T/F viruses.